The European GWAS-identified risk SNP rs457717 within IQGAP2 is not associated with age-related hearing impairment in Han male Chinese population

被引:3
作者
Luo, Huajie [1 ]
Wu, Hao [2 ,3 ]
Shen, Hailian [4 ]
Chen, Haifeng [5 ,6 ]
Yang, Tao [2 ,3 ]
Huang, Zhiwu [2 ,3 ]
Jin, Xiaojie [1 ]
Pang, Xiuhong [2 ,3 ]
Li, Lei [2 ,3 ]
Hu, Xianting [2 ]
Jiang, Xuemei [3 ,8 ]
Fan, Zhuping [7 ]
Li, Jiping [1 ]
机构
[1] Shanghai Jiao Tong Univ, Sch Med, Renji Hosp, Dept Otolaryngol, 160 Pujian Rd Pudong New Area, Shanghai 200127, Peoples R China
[2] Shanghai Jiao Tong Univ, Xinhua Hosp, Dept Otolaryngol Head & Neck Surg, Shanghai, Peoples R China
[3] Shanghai Jiao Tong Univ, Sch Med, Ear Inst, Shanghai, Peoples R China
[4] Shanghai Jiao Tong Univ, Sch Med, Renji Med Clin Stem Cell Res Ctr 10, Renji Hosp, Shanghai, Peoples R China
[5] Shanghai Ctr Bioinformat Technol, Shanghai 200235, Peoples R China
[6] Shanghai Jiao Tong Univ, Dept Bioinformat & Biostat, Coll Life Sci & Biotechnol, Shanghai 200240, Peoples R China
[7] Shanghai Jiao Tong Univ, Sch Med, Renji Hosp, Hlth Check Up Ctr, Shanghai, Peoples R China
[8] Shanghai Jiao Tong Univ, Sch Med, Xinhua Hosp, Hlth Check Up Ctr, Shanghai, Peoples R China
关键词
Age-related hearing impairment; IQ motif-containing GTPase activating-like protein; Candidate gene; Association study; Phenotype; Genotype; CYTOSKELETAL REORGANIZATION; GENE POLYMORPHISM; OLDER-ADULTS; PRESBYCUSIS; FAMILY; CADHERIN-23; THRESHOLDS; PREVALENCE; CALMODULIN; EFFECTOR;
D O I
10.1007/s00405-015-3711-9
中图分类号
R76 [耳鼻咽喉科学];
学科分类号
100213 ;
摘要
This study aimed to test the association between the European GWAS-identified risk IQGAP2 SNP rs457717 (A > G) and age-related hearing impairment (ARHI) in a Han male Chinese (HMC) population. A total of 2420 HMC subjects were divided into two groups [group 70+: > 70 years (n = 1306), and group 70-: a parts per thousand currency sign70 years (n = 1114)]. The participants were categorised into case and control groups according to Z high scores for group 70- and the severity of hearing loss and different audiogram shapes identified by K-means cluster analysis for group 70+. The IQGAP2 tagSNP rs457717 was genotyped in accordance with the different ARHI phenotypes. The genotype distributions of IQGAP2 (AA/AG/GG) were not significantly different between the case and control groups (P = 0.613 for group 70-; P = 0.602 for group 70+). Compared with genotype AA, the ORs of genotypes AG and GG for ARHI were not significantly different following adjustment for other environmental risk factors. We demonstrated that the IQGAP2 TagSNP rs457717 (A/G) was not associated with ARHI in HMC individuals.
引用
收藏
页码:1677 / 1687
页数:11
相关论文
共 49 条
[1]  
[Anonymous], 2000, 7029 ISO
[2]   Antioxidant enzymes, presbycusis, and ethnic variability [J].
Bared, Anthony ;
Ouyang, Xiaomei ;
Angeli, Simon ;
Hoang, Kimberly ;
Yan, Denise ;
Liu, Xue Zhong .
OTOLARYNGOLOGY-HEAD AND NECK SURGERY, 2010, 143 (02) :263-268
[3]   Mutation of CDH23, encoding a new member of the cadherin gene family, causes Usher syndrome type 1D [J].
Bolz, H ;
von Brederlow, B ;
Ramírez, A ;
Bryda, EC ;
Kutsche, K ;
Nothwang, HG ;
Seeliger, M ;
Cabrera, MDS ;
Vila, MC ;
Molina, OP ;
Gal, A ;
Kubisch, C .
NATURE GENETICS, 2001, 27 (01) :108-112
[4]   Usher syndrome 1D and nonsyndromic autosomal recessive deafness DFNB12 are caused by allelic mutations of the novel cadherin-like gene CDH23 [J].
Bork, JM ;
Peters, LM ;
Riazuddin, S ;
Bernstein, SL ;
Ahmed, ZM ;
Ness, SL ;
Polomeno, R ;
Ramesh, A ;
Schloss, M ;
Srisailpathy, CRS ;
Wayne, S ;
Bellman, S ;
Desmukh, D ;
Ahmed, Z ;
Khan, SN ;
Kaloustian, VMD ;
Li, XC ;
Lalwani, A ;
Riazuddin, S ;
Bitner-Glindzicz, M ;
Nance, WE ;
Liu, XZ ;
Wistow, G ;
Smith, RJH ;
Griffith, AJ ;
Wilcox, ER ;
Friedman, TB ;
Morell, RJ .
AMERICAN JOURNAL OF HUMAN GENETICS, 2001, 68 (01) :26-37
[5]   IQGAP1 as signal integrator:: Ca2+, calmodulin, Cdc42 and the cytoskeleton [J].
Briggs, MW ;
Sacks, DB .
FEBS LETTERS, 2003, 542 (1-3) :7-11
[6]  
Brill S, 1996, MOL CELL BIOL, V16, P4869
[7]   Genetic and environmental influences on self-reported reduced hearing in the old and oldest old [J].
Christensen, K ;
Frederiksen, H ;
Hoffman, HJ .
JOURNAL OF THE AMERICAN GERIATRICS SOCIETY, 2001, 49 (11) :1512-1517
[8]  
Cruickshanks KJ, 1998, AM J EPIDEMIOL, V148, P879
[9]   Distinct PAR/IQGAP expression patterns during murine development: implications for thrombin-associated cytoskeletal reorganization [J].
Cupit, LD ;
Schmidt, VA ;
Miller, F ;
Bahou, WF .
MAMMALIAN GENOME, 2004, 15 (08) :618-629
[10]   Socioeconomic differences in the prevalence of common chronic diseases: an overview of eight European countries [J].
Dalstra, JAA ;
Kunst, AE ;
Borrell, C ;
Breeze, E ;
Cambois, E ;
Costa, G ;
Geurts, JJM ;
Lahelma, E ;
Van Oyen, H ;
Rasmussen, NK ;
Regidor, E ;
Spadea, T ;
Mackenbach, JP .
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY, 2005, 34 (02) :316-326