Structure and gene cluster of the O-antigen of Escherichia coli O41

被引:4
|
作者
Zhu, Hongfei [2 ]
Perepelov, Andrei V. [1 ]
Senchenkova, Sof'ya N. [1 ]
Shashkov, Alexander S. [1 ]
Wang, Lei [2 ]
Knirel, Yuriy A. [1 ]
机构
[1] Russian Acad Sci, ND Zelinsky Inst Organ Chem, Moscow 119991, Russia
[2] Nankai Univ, TEDA, TEDA Sch Biol Sci & Biotechnol, Tianjin 300071, Peoples R China
基金
俄罗斯基础研究基金会; 美国国家科学基金会;
关键词
Escherichia coli; Bacterial polysaccharide structure; O-antigen; Lipopolysaccharide; O-antigen gene cluster; BIOSYNTHESIS; POLYSACCHARIDES; IDENTIFICATION; ORGANIZATION;
D O I
10.1016/j.carres.2011.12.009
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The acidic O-polysaccharide (O-antigen) of Escherichia coli O41 was studied by sugar analysis along with 1D and 2D H-1 and C-13 NMR spectroscopy, and the following structure of the branched hexasaccharide repeating unit was established: beta-D-GlcpA 1 down arrow 4 -> 3)-alpha-D-Galp-(1 -> 3)-alpha-L-Fucp-(1 -> 4)-beta-D-GlcpNAc-(1 -> 3)-alpha-L-Fucp-(1 -> 3)->beta-D-GlcpNAc-(1 -> This structure is unique among the known structures of bacterial polysaccharides. The O-antigen gene cluster of E. coli O41 was sequenced. The gene functions were tentatively assigned by a comparison with sequences in the available databases and found to be in full agreement with the E. coli O41 O-polysaccharide structure. (C) 2011 Elsevier Ltd. All rights reserved.
引用
收藏
页码:86 / 89
页数:4
相关论文
共 50 条
  • [21] Structure and gene cluster of the O-antigen of Escherichia coli O156 containing a pyruvic acid acetal
    Duan, Zhifeng
    Senchenkova, Sof'ya N.
    Guo, Xi
    Perepelov, Andrei V.
    Shashkov, Alexander S.
    Liu, Bin
    Knirel, Yuriy A.
    CARBOHYDRATE RESEARCH, 2016, 430 : 24 - 28
  • [22] SEQUENCE AND ANALYSIS OF THE O-ANTIGEN GENE (RFB) CLUSTER OF ESCHERICHIA-COLI-O111
    BASTIN, DA
    REEVES, PR
    GENE, 1995, 164 (01) : 17 - 23
  • [23] Structure and gene cluster of the O-antigen of Escherichia albertii O1 resembling the O-antigen of Pseudomonas aeruginosa O5
    Zheng, Han
    Shashkov, Alexander S.
    Xiong, Yanwen
    Naumenko, Olesya I.
    Wang, Hong
    Senchenkova, Sof'ya N.
    Wang, Jianping
    Knirel, Yuriy A.
    CARBOHYDRATE RESEARCH, 2017, 446 : 28 - 31
  • [24] Structure and genetics of the O-antigen of Escherichia coli 0158
    Perepelov, Andrei V.
    Wang, Quan
    Shashkov, Alexander S.
    Wen, Liuqing
    Wang, Lei
    Knirel, Yuriy A.
    CARBOHYDRATE RESEARCH, 2011, 346 (14) : 2274 - 2277
  • [25] Elucidation of the O-antigen structure of Escherichia coli O63
    Stahle, Jonas
    Fontana, Carolina
    Weintraub, Andrej
    Widmalm, Goran
    GLYCOBIOLOGY, 2019, 29 (02) : 179 - 187
  • [26] A complete view of the genetic diversity of the Escherichia coli O-antigen biosynthesis gene cluster
    Iguchi, Atsushi
    Iyoda, Sunao
    Kikuchi, Taisei
    Ogura, Yoshitoshi
    Katsura, Keisuke
    Ohnishi, Makoto
    Hayashi, Tetsuya
    Thomson, Nicholas R.
    DNA RESEARCH, 2015, 22 (01) : 101 - 107
  • [27] STRUCTURE OF THE O-ANTIGEN OF ESCHERICHIA-COLI-K-12 AND THE SEQUENCE OF ITS RFB GENE-CLUSTER
    STEVENSON, G
    NEAL, B
    LIU, D
    HOBBS, M
    PACKER, NH
    BATLEY, M
    REDMOND, JW
    LINDQUIST, L
    REEVES, P
    JOURNAL OF BACTERIOLOGY, 1994, 176 (13) : 4144 - 4156
  • [28] Characterization of Escherichia coli 086 O-antigen gene cluster and identification of O86-specific genes
    Feng, L
    Han, WQ
    Wang, Q
    Bastin, DA
    Wang, L
    VETERINARY MICROBIOLOGY, 2005, 106 (3-4) : 241 - 248
  • [29] STRUCTURE OF THE O-ANTIGEN OF ESCHERICHIA-COLI 0119 LIPOPOLYSACCHARIDE
    ANDERSON, AN
    RICHARDS, JC
    PERRY, MB
    CARBOHYDRATE RESEARCH, 1992, 237 : 249 - 262
  • [30] Sequencing of Escherichia coli O111 O-antigen gene cluster and identification of O111-specific genes
    Wang, L
    Curd, H
    Qu, WJ
    Reeves, PR
    JOURNAL OF CLINICAL MICROBIOLOGY, 1998, 36 (11) : 3182 - 3187