Crystallization and preliminary X-ray diffraction studies of sortase A from Streptococcus pneumoniae

被引:0
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作者
Misra, Anurag [1 ]
Biswas, Tora [2 ]
Das, Sreetama [1 ]
Marathe, Uttara [2 ]
Sehgal, Devinder [2 ]
Roy, Rajendra P. [2 ]
Suryanarayanarao, Ramakumar [1 ]
机构
[1] Indian Inst Sci, Dept Phys, Bangalore 560012, Karnataka, India
[2] Natl Inst Immunol, New Delhi 110067, India
关键词
STAPHYLOCOCCUS-AUREUS SORTASE; GRAM-POSITIVE BACTERIA; CELL-WALL; PROTEIN CRYSTALS; SURFACE-PROTEINS; TRANSPEPTIDASE; LIKELIHOOD;
D O I
10.1107/S1744309111029952
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Sortases are cell-membrane-anchored cysteine transpeptidases that are essential for the assembly and anchoring of cell-surface adhesins in Gram-positive bacteria. Thus, they play critical roles in virulence, infection and colonization by pathogens. Sortases have been classified into four types based on their primary sequence and the target-protein motifs that they recognize. All Gram-positive bacteria express a class A housekeeping sortase (SrtA). Sortase A from Streptococcus pneumoniae (NP_358691) has been crystallized in two crystal forms. Diamond-shaped crystals of Delta N(59)SrtA diffracted to 4.0 angstrom resolution and belonged to a tetragonal system with unit-cell parameters a = b = 122.8, c = 86.5 angstrom, alpha = beta = gamma = 90 degrees, while rod-shaped crystals of Delta N(81)SrtA diffracted to 2.91 angstrom resolution and belonged to the monoclinic space group P2(1) with unit-cell parameters a = 66.8, b = 103.47, c = 74.79 angstrom, alpha = gamma = 90, beta = 115.65 degrees. The Matthews coefficient (V-M = 2.77 angstrom(3) Da(-1)) with similar to 56% solvent content suggested the presence of four molecules in the asymmetric unit for Delta N(81)SrtA. Also, a multi-copy search using a monomer as a probe in the molecular-replacement method resulted in the successful location of four sortase molecules in the asymmetric unit, with statistics R = 41.61, R-free = 46.44, correlation coefficient (CC) = 64.31, CCfree = 57.67.
引用
收藏
页码:1195 / 1198
页数:4
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