Prognostic signature of esophageal adenocarcinoma based on pyroptosis-related genes

被引:3
|
作者
Li, Guo-Sheng [1 ]
He, Rong-Quan [2 ]
Liu, Jun [3 ]
He, Juan [1 ]
Fu, Zong-Wang [3 ]
Yang, Lin-Jie [1 ]
Ma, Jie [2 ]
Yang, Li-Hua [1 ]
Zhou, Hua-Fu [3 ]
Zeng, Jiang-Hui [4 ]
Chen, Gang [1 ]
机构
[1] Guangxi Med Univ, Affiliated Hosp 1, Dept Pathol, 6 Shuangyong Rd, Nanning 530031, Guangxi Zhuang, Peoples R China
[2] Guangxi Med Univ, Affiliated Hosp 1, Dept Med Oncol, 6 Shuangyong Rd, Nanning 530031, Guangxi Zhuang, Peoples R China
[3] Guangxi Med Univ, Affiliated Hosp 1, Dept Cardiothorac Surg, 6 Shuangyong Rd, Nanning 530031, Guangxi Zhuang, Peoples R China
[4] Guangxi Med Univ, Affiliated Hosp 3, Dept Clin Lab, Nanning Peoples Hosp 2, 13 Dancun Rd, Nanning 530031, Guangxi Zhuang, Peoples R China
关键词
Adenocarcinoma of esophagus; Pyroptosis; Prognosis; Gene expression;
D O I
10.1186/s12920-022-01196-x
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background The role of pyroptosis-related genes (PRGs) in esophageal adenocarcinoma (EAC) remains unknown. Methods In this study, the first PRGs prognostic signature (PPS) of EAC was constructed based on the results of multivariate stepwise Cox regression analysis. Based on 1,047 samples of EAC and normal esophagus (NE), differentially expressed PRGs were selected for the establishment of the PPS. The discrimination effect of this PPS was detected by receiver operating characteristic curves, and the prognosis value of this PPS was determined through Cox regression analysis and Kaplan-Meier curves. Net benefits of the EAC patients from the nomogram (constructed based on the PPS and some clinical parameters) were assessed via decision curve analysis. The potential molecular mechanism of the PPS in EAC was explored via gene set enrichment analysis. The ability of PPS to distinguish EAC and NE was evaluated based on the results of summary receiver operating characteristic curves. Results The significant prognostic value of PPS can be observed at all of the training cohort, test cohort, and validation cohort, such as its independent risk role in the prognosis of the EAC patients (hazard ratio > 0; 95% CI not including 0). The positive net benefits of the nomogram for the EAC patients can be detected via decision curve analysis, and the potential molecular mechanism of the PPS in EAC is likely related to cell pyroptosis. Last, some of the PRGs (particularly CASP5) included in this PPS specifically support its feasibility for identifying EAC (area under the curves > 0.7). Conclusions The construction of this PPS in EAC enhances the present understanding of the relationship between PRGs and EAC, thus representing a novel approach to the clinical identification and management of EAC based on PRGs.
引用
收藏
页数:14
相关论文
共 50 条
  • [41] Development and verification of a prognostic model for colon cancer on pyroptosis-related genes
    Wu, Zizhen
    Wang, Bo
    Ye, Yingjiang
    Wang, Shan
    Jiang, Kewei
    FRONTIERS IN GENETICS, 2022, 13
  • [42] A Prognostic Signature Consisting of Pyroptosis-Related Genes and SCAF11 for Predicting Immune Response in Breast Cancer
    Chu, Ling
    Yi, Qiaoli
    Yan, Yuanliang
    Peng, Jinwu
    Li, Zhilan
    Jiang, Feng
    He, Qingchun
    Ouyang, Lingzi
    Wu, Shangjun
    Fu, Chencheng
    Liu, Ying
    Xu, Zhijie
    FRONTIERS IN MEDICINE, 2022, 9
  • [43] Pyroptosis-related genes regulate proliferation and invasion of pancreatic cancer and serve as the prognostic signature for modeling patient survival
    Song, Wenjing
    Liu, Zhicheng
    Wang, Kunlei
    Tan, Kai
    Zhao, Anbang
    Li, Xinyin
    Yuan, Yufeng
    Yang, Zhiyong
    DISCOVER ONCOLOGY, 2022, 13 (01)
  • [44] Construction of a Pyroptosis-Related Genes Signature to Improve the Prognostic Prediction and Therapeutic Drugs Selection in Patients with Pancreatic Cancer
    Li, Changjuan
    Wang, Min
    Wei, Junwei
    Zhang, Wenjuan
    Liu, Haitao
    Zhao, Dongqiang
    INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2022, 15 : 6387 - 6403
  • [45] Pyroptosis-related genes regulate proliferation and invasion of pancreatic cancer and serve as the prognostic signature for modeling patient survival
    Wenjing Song
    Zhicheng Liu
    Kunlei Wang
    Kai Tan
    Anbang Zhao
    Xinyin Li
    Yufeng Yuan
    Zhiyong Yang
    Discover Oncology, 13
  • [46] Comprehensive genomic signature of pyroptosis-related genes and relevant characterization in hepatocellular carcinoma
    Wang, Sheng
    Gao, Songsen
    Shan, Liang
    Qian, Xueyi
    Luan, Jiajie
    Lv, Xiongwen
    PEERJ, 2023, 11
  • [47] Prognostic pyroptosis-related lncRNA signature predicts the efficacy of immunotherapy in hepatocellular carcinoma
    Cheng, Zina
    Han, Juechen
    Jiang, Fa
    Chen, Weiyi
    Ma, Xiaolu
    BIOCHEMISTRY AND BIOPHYSICS REPORTS, 2022, 32
  • [48] Subtype Classification, Immune Infiltration, and Prognosis Analysis of Lung Adenocarcinoma Based on Pyroptosis-Related Genes
    Liu, Qi
    Fang, Liguang
    Gao, Chundi
    Liu, Cun
    Yu, Haiyang
    Wu, Jibiao
    Hou, Lin
    Sun, Changgang
    BIOMED RESEARCH INTERNATIONAL, 2022, 2022
  • [49] Predicting the prognosis of glioma by pyroptosis-related signature
    Chao, Bo
    Jiang, Fenjun
    Bai, Huiru
    Meng, Peipei
    Wang, Lu
    Wang, Fei
    JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2022, 26 (01) : 133 - 143
  • [50] A Novel Risk Signature with Seven Pyroptosis-Related Genes for Prognosis Prediction in Glioma
    Huang, Qianrong
    Li, Jianwen
    Mo, Ligen
    Zhao, Yinnong
    WORLD NEUROSURGERY, 2022, 159 : E285 - E302