Circulating miRNAs as biomarkers for severe acute pancreatitis associated with acute lung injury

被引:30
作者
Lu, Xiao-Guang [1 ]
Kang, Xin [1 ]
Zhan, Li-Bin [2 ]
Kang, Li-Min [3 ]
Fan, Zhi-Wei [1 ]
Bai, Li-Zhi [1 ]
机构
[1] Dalian Univ, Zhongshan Hosp, Dept Emergency, Dalian 116001, Liaoning, Peoples R China
[2] Nanjing Univ Chinese Med, Coll Basic Med, Nanjing 210000, Jiangsu, Peoples R China
[3] Puer Peoples Hosp, Dept Hepatobiliary & Pancreat Surg, Puer 665000, Yunnan, Peoples R China
基金
中国国家自然科学基金;
关键词
miRNAs; Severe acute pancreatitis; Acute lung injury; Biomarker; Microarray analysis; COLONY-ENHANCING FACTOR; MICRORNAS; CANCER; EXPRESSION; MICROARRAYS; METASTASIS; MEDIATOR; PLASMA; KINASE; ALPHA;
D O I
10.3748/wjg.v23.i41.7440
中图分类号
R57 [消化系及腹部疾病];
学科分类号
摘要
AIM To identify circulating micro (mi)RNAs as biological markers for prediction of severe acute pancreatitis (SAP) with acute lung injury (ALI). METHODS Twenty-four serum samples were respectively collected and classified as SAP associated with ALI and SAP without ALI, and the miRNA expression profiles were determined by microarray analysis. These miRNAs were validated by quantitative reverse transcription-polymerase chain reaction, and their putative targets were predicted by the online software TargetScan, miRanda and PicTar database. Gene ontology (GO) and Kyoto encyclopedia of genes and genomes (commonly known as KEGG) were used to predict their possible functions and pathways involved. RESULTS We investigated 287 miRNAs based on microarray data analysis. Twelve miRNAs were differentially expressed in the patients with SAP with ALI and those with SAP without ALI. Hsa-miR-1260b, 762, 22-3p, 23b and 23a were differently up-regulated and hsa-miR-550a*, 324-5p, 484, 331-3p, 140-3p, 342-3p and 150 were differently down-regulated in patients with SAP with ALI compared to those with SAP without ALI. In addition, 85 putative target genes of the significantly dysregulated miRNAs were found by TargetScan, miRanda and PicTar. Finally, GO and pathway network analysis showed that they were mainly enriched in signal transduction, metabolic processes, cytoplasm and cell membranes. CONCLUSION This is the first study to identify 12 circulating miRNAs in patients with SAP with ALI, which may be biomarkers for prediction of ALI after SAP.
引用
收藏
页码:7440 / 7449
页数:10
相关论文
共 40 条
[1]   An integrated genome-wide approach to discover deregulated microRNAs in non-small cell lung cancer: Clinical significance of miR-23b-3p deregulation [J].
Begum, Shahnaz ;
Hayashi, Masamichi ;
Ogawa, Takenori ;
Jabboure, Fayez J. ;
Brait, Mariana ;
Izumchenko, Evgeny ;
Tabak, Sarit ;
Ahrendt, Steven A. ;
Westra, William H. ;
Koch, Wayne ;
Sidransky, David ;
Hoque, Mohammad O. .
SCIENTIFIC REPORTS, 2015, 5
[2]   Analysis of DNA-microarrays produced by inverse in situ oligonucleotide synthesis [J].
Beier, M ;
Hoheisel, JD .
JOURNAL OF BIOTECHNOLOGY, 2002, 94 (01) :15-22
[3]   THE AMERICAN-EUROPEAN CONSENSUS CONFERENCE ON ARDS - DEFINITIONS, MECHANISMS, RELEVANT OUTCOMES, AND CLINICAL-TRIAL COORDINATION [J].
BERNARD, GR ;
ARTIGAS, A ;
BRIGHAM, KL ;
CARLET, J ;
FALKE, K ;
HUDSON, L ;
LAMY, M ;
LEGALL, JR ;
MORRIS, A ;
SPRAGG, R ;
COCHIN, B ;
LANKEN, PN ;
LEEPER, KV ;
MARINI, J ;
MURRAY, JF ;
OPPENHEIMER, L ;
PESENTI, A ;
REID, L ;
RINALDO, J ;
VILLAR, J ;
VANASBECK, BS ;
DHAINAUT, JF ;
MANCEBO, J ;
MATTHAY, M ;
MEYRICK, B ;
PAYEN, D ;
PERRET, C ;
FOWLER, AA ;
SCHALLER, MD ;
HUDSON, LD ;
HYERS, T ;
KNAUS, W ;
MATTHAY, R ;
PINSKY, M ;
BONE, RC ;
BOSKEN, C ;
JOHANSON, WG ;
LEWANDOWSKI, K ;
REPINE, J ;
RODRIGUEZROISIN, R ;
ROUSSOS, C ;
ANTONELLI, MA ;
BELOUCIF, S ;
BIHARI, D ;
BURCHARDI, H ;
LEMAIRE, F ;
MONTRAVERS, P ;
PETTY, TL ;
ROBOTHAM, J ;
ZAPOL, W .
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 1994, 149 (03) :818-824
[4]  
Cai ZG, 2012, CAN J PHYSIOL PHARM, V90, P37, DOI [10.1139/Y11-095, 10.1139/y11-095]
[5]   Characterization of microRNAs in serum: a novel class of biomarkers for diagnosis of cancer and other diseases [J].
Chen, Xi ;
Ba, Yi ;
Ma, Lijia ;
Cai, Xing ;
Yin, Yuan ;
Wang, Kehui ;
Guo, Jigang ;
Zhang, Yujing ;
Chen, Jiangning ;
Guo, Xing ;
Li, Qibin ;
Li, Xiaoying ;
Wang, Wenjing ;
Zhang, Yan ;
Wang, Jin ;
Jiang, Xueyuan ;
Xiang, Yang ;
Xu, Chen ;
Zheng, Pingping ;
Zhang, Juanbin ;
Li, Ruiqiang ;
Zhang, Hongjie ;
Shang, Xiaobin ;
Gong, Ting ;
Ning, Guang ;
Wang, Jun ;
Zen, Ke ;
Zhang, Junfeng ;
Zhang, Chen-Yu .
CELL RESEARCH, 2008, 18 (10) :997-1006
[6]   Creation of Lung-Targeted Dexamethasone Immunoliposome and Its Therapeutic Effect on Bleomycin-Induced Lung Injury in Rats [J].
Chen, Xue-Yuan ;
Wang, Shan-Mei ;
Li, Nan ;
Hu, Yang ;
Zhang, Yuan ;
Xu, Jin-Fu ;
Li, Xia ;
Ren, Jie ;
Su, Bo ;
Yuan, Wei-Zhong ;
Teng, Xin-Rong ;
Zhang, Rong-Xuan ;
Jiang, Dian-hua ;
Mulet, Xavier ;
Li, Hui-Ping .
PLOS ONE, 2013, 8 (03)
[7]  
De Campos Tercio, 2007, Surg Infect (Larchmt), V8, P107, DOI 10.1089/sur.2006.011
[8]   The MicroRNA-23b/27b/24 Cluster Promotes Breast Cancer Lung Metastasis by Targeting Metastasis-suppressive Gene Prosaposin [J].
Ell, Brian ;
Qiu, Qiong ;
Wei, Yong ;
Mercatali, Laura ;
Ibrahim, Toni ;
Amadori, Dino ;
Kang, Yibin .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2014, 289 (32) :21888-21895
[9]  
Fedorkiv M B, 2015, Klin Khir, P22
[10]   In situ synthesis of oligonucleotide microarrays [J].
Gao, XL ;
Gulari, E ;
Zhou, XC .
BIOPOLYMERS, 2004, 73 (05) :579-596