Molecular models of cyclin-dependent kinase 4 complexed with indirubin and its analogues

被引:0
作者
Zhang, N [1 ]
Jiang, YN [1 ]
Zou, JW [1 ]
Zeng, M [1 ]
Hu, GX [1 ]
Yu, QS [1 ]
机构
[1] Zhejiang Univ, Ningbo Inst Technol, Key Lab Mol Design & Nutr Engn, Ningbo 315104, Peoples R China
关键词
cyclin-dependent-kinase; indirubin; homology modeling; molecular docking; anticancer;
D O I
暂无
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Indirubin and its analogue, indirubin-5-sulphonic acid, have shown potent ability to inhibit cyclin-dependent-kinases (CDKs). Using the crystal structure of CDK2 complexed with indirubin-5sulphonate as the template, models of CDK4 complexed with indirubin and its analogue were built by homology modeling and molecular docking. The structure comparisons of CDK4 with indirubin and its analogue could explain different inhibition ability. Moreover, the different activity of indirubin-5-sulphonic acid complexed with CDK2 and CDK4 was also illustrated. The model structure provided the basis for designing more potent anticancer drug.
引用
收藏
页码:809 / 813
页数:5
相关论文
共 13 条
[1]  
*ACC INC, 2003, DS MOD VERS 1 0 US M
[2]   Structure of human uropepsin at 2.45 Å resolution [J].
Canduri, F ;
Teodoro, LGVL ;
Fadel, V ;
Lorenzi, CCB ;
Hial, V ;
Gomes, RAS ;
Neto, JR ;
de Azevedo, WF .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2001, 57 :1560-1570
[3]   Molecular model for the binary complex of uropepsin and pepstatin [J].
de Azevedo, WF ;
Canduri, F ;
Fadel, V ;
Teodoro, LGVL ;
Hial, V ;
Gomes, RAS .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2001, 287 (01) :277-281
[4]   Inhibition of cyclin-dependent kinases by purine analogues - Crystal structure of human cdk2 complexed with roscovitine [J].
DeAzevedo, WF ;
Leclerc, S ;
Meijer, L ;
Havlicek, L ;
Strnad, M ;
Kim, SH .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1997, 243 (1-2) :518-526
[5]   Structural basis for specificity and potency of a flavonoid inhibitor of human CDK2, a cell cycle kinase [J].
deAzevedo, WF ;
MuellerDieckmann, HJ ;
SchulzeGahmen, U ;
Worland, PJ ;
Sausville, E ;
Kim, SH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (07) :2735-2740
[6]   Indirubin, the active constituent of a Chinese antileukaemia medicine, inhibits cyclin-dependent kinases [J].
Hoessel, R ;
Leclerc, S ;
Endicott, JA ;
Nobel, MEM ;
Lawrie, A ;
Tunnah, P ;
Leost, M ;
Damiens, E ;
Marie, D ;
Marko, D ;
Niederberger, E ;
Tang, WC ;
Eisenbrand, G ;
Meijer, L .
NATURE CELL BIOLOGY, 1999, 1 (01) :60-67
[7]   Structure-based generation of a new class of potent Cdk4 inhibitors:: New de novo design strategy and library design [J].
Honma, T ;
Hayashi, K ;
Aoyama, T ;
Hashimoto, N ;
Machida, T ;
Fukasawa, K ;
Iwama, T ;
Ikeura, C ;
Ikuta, M ;
Suzuki-Takahashi, I ;
Iwasawa, Y ;
Hayama, T ;
Nishimura, S ;
Morishima, H .
JOURNAL OF MEDICINAL CHEMISTRY, 2001, 44 (26) :4615-4627
[8]   CYCLINS AND CANCER .2. CYCLIN-D AND CDK INHIBITORS COME OF AGE [J].
HUNTER, T ;
PINES, J .
CELL, 1994, 79 (04) :573-582
[9]   Crystallographic approach to identification of cyclin-dependent kinase 4 (CDK4)-specific inhibitors by using CDK4 mimic CDK2 protein [J].
Ikuta, M ;
Kamata, K ;
Fukasawa, K ;
Honma, T ;
Machida, T ;
Hirai, H ;
Suzuki-Takahashi, I ;
Hayama, T ;
Nishimura, S .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (29) :27548-27554
[10]   Prediction of the three-dimensional structure of human interleukin-7 by homology modeling [J].
Kroemer, RT ;
Doughty, SW ;
Robinson, AJ ;
Richards, WG .
PROTEIN ENGINEERING, 1996, 9 (06) :493-498