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On-the-fly adiabatically switched semiclassical initial value representation molecular dynamics for vibrational spectroscopy of biomolecules
被引:18
作者:
Botti, Giacomo
[1
]
Ceotto, Michele
[1
]
Conte, Riccardo
[1
]
机构:
[1] Univ Milan, Dipartimento Chim, Via Golgi 19, I-20133 Milan, Italy
基金:
欧洲研究理事会;
关键词:
HERMAN-KLUK PROPAGATOR;
MATRIX-ISOLATION;
AMINO-ACIDS;
GLYCINE;
PROLINE;
CONFORMERS;
ENERGIES;
SPECTRA;
SYSTEMS;
D O I:
10.1063/5.0075220
中图分类号:
O64 [物理化学(理论化学)、化学物理学];
学科分类号:
070304 ;
081704 ;
摘要:
Semiclassical (SC) vibrational spectroscopy is a technique capable of reproducing quantum effects (such as zero-point energies, quantum resonances, and anharmonic overtones) from classical dynamics runs even in the case of very large dimensional systems. In a previous study [Conte et al. J. Chem. Phys. 151, 214107 (2019)], a preliminary sampling based on adiabatic switching has been shown to be able to improve the precision and accuracy of semiclassical results for challenging model potentials and small molecular systems. In this paper, we investigate the possibility to extend the technique to larger (bio)molecular systems whose dynamics must be integrated by means of ab initio "on-the-fly " calculations. After some preliminary tests on small molecules, we obtain the vibrational frequencies of glycine improving on pre-existing SC calculations. Finally, the new approach is applied to 17-atom proline, an amino acid characterized by a strong intramolecular hydrogen bond.
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页数:11
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