Facile measurement of 1H-15N residual dipolar couplings in larger perdeuterated proteins

被引:75
|
作者
Fitzkee, Nicholas C. [1 ]
Bax, Ad [1 ]
机构
[1] NIDDKD, Chem Phys Lab, NIH, Bethesda, MD 20892 USA
关键词
ARTSY; Catalytic core domain; HIV integrase; Quantitative J correlation; TROSY; RDC; HIV-1; INTEGRASE; PULSE SEQUENCES; BIOLOGICAL MACROMOLECULES; CRYSTAL-STRUCTURE; CATALYTIC DOMAIN; LIQUID-CRYSTAL; NMR STRUCTURES; ACTIVE-SITE; RELAXATION; ALIGNMENT;
D O I
10.1007/s10858-010-9441-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We present a simple method, ARTSY, for extracting (1)J(NH) couplings and H-1-N-15 RDCs from an interleaved set of two-dimensional H-1-N-15 TROSY-HSQC spectra, based on the principle of quantitative J correlation. The primary advantage of the ARTSY method over other methods is the ability to measure couplings without scaling peak positions or altering the narrow line widths characteristic of TROSY spectra. Accuracy of the method is demonstrated for the model system GB3. Application to the catalytic core domain of HIV integrase, a 36 kDa homodimer with unfavorable spectral characteristics, demonstrates its practical utility. Precision of the RDC measurement is limited by the signal-to-noise ratio, S/N, achievable in the 2D TROSY-HSQC spectrum, and is approximately given by 30/(S/N) Hz.
引用
收藏
页码:65 / 70
页数:6
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