Replication Validity of Initial Association Studies: A Comparison between Psychiatry, Neurology and Four Somatic Diseases

被引:18
|
作者
Dumas-Mallet, Estelle [1 ,2 ,3 ]
Button, Katherine [4 ]
Boraud, Thomas [1 ,2 ,6 ]
Munafo, Marcus [5 ]
Gonon, Francois [1 ,2 ]
机构
[1] CNRS, Inst Neurodegenerat Dis, UMR 5293, Bordeaux, France
[2] Univ Bordeaux, Inst Neurodegenerat Dis, UMR 5293, Bordeaux, France
[3] CNRS, UMR 5116, Ctr Emile Durkheim, Bordeaux, France
[4] Univ Bath, Dept Psychol, Bath BA2 7AY, Avon, England
[5] Univ Bristol, MRC Integrat Epidemiol Unit, Bristol, Avon, England
[6] CHU Bordeaux, Bordeaux, France
来源
PLOS ONE | 2016年 / 11卷 / 06期
基金
英国经济与社会研究理事会; 英国医学研究理事会;
关键词
GENETIC ASSOCIATIONS; REDUCING WASTE; EFFECT SIZES; BIAS; METAANALYSES; PUBLICATION; CREDIBILITY; BIOMARKERS; COMMON;
D O I
10.1371/journal.pone.0158064
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Context There are growing concerns about effect size inflation and replication validity of association studies, but few observational investigations have explored the extent of these problems. Objective Using meta-analyses to measure the reliability of initial studies and explore whether this varies across biomedical domains and study types (cognitive/behavioral, brain imaging, genetic and "others"). Methods We analyzed 663 meta-analyses describing associations between markers or risk factors and 12 pathologies within three biomedical domains (psychiatry, neurology and four somatic diseases). We collected the effect size, sample size, publication year and Impact Factor of initial studies, largest studies (i.e., with the largest sample size) and the corresponding meta-analyses. Initial studies were considered as replicated if they were in nominal agreement with meta-analyses and if their effect size inflation was below 100%. Results Nominal agreement between initial studies and meta-analyses regarding the presence of a significant effect was not better than chance in psychiatry, whereas it was somewhat better in neurology and somatic diseases. Whereas effect sizes reported by largest studies and meta-analyses were similar, most of those reported by initial studies were inflated. Among the 256 initial studies reporting a significant effect (p<0.05) and paired with significant meta-analyses, 97 effect sizes were inflated by more than 100%. Nominal agreement and effect size inflation varied with the biomedical domain and study type. Indeed, the replication rate of initial studies reporting a significant effect ranged from 6.3% for genetic studies in psychiatry to 86.4% for cognitive/behavioral studies. Comparison between eight subgroups shows that replication rate decreases with sample size and "true" effect size. We observed no evidence of association between replication rate and publication year or Impact Factor. Conclusion The differences in reliability between biological psychiatry, neurology and somatic diseases suggest that there is room for improvement, at least in some subdomains.
引用
收藏
页数:20
相关论文
共 5 条
  • [1] Poor replication validity of biomedical association studies reported by newspapers
    Dumas-Mallet, Estelle
    Smith, Andy
    Boraud, Thomas
    Gonon, Francois
    PLOS ONE, 2017, 12 (02):
  • [2] Replication of past candidate loci for common diseases and phenotypes in 100 genome-wide association studies
    Siontis, Konstantinos C. M.
    Patsopoulos, Nikolaos A.
    Ioannidis, John P. A.
    EUROPEAN JOURNAL OF HUMAN GENETICS, 2010, 18 (07) : 832 - 837
  • [3] Association Between APOL1 Genotype and Kidney Diseases and Annual Kidney Function Change: A Systematic Review and Meta-Analysis of the Prospective Studies
    Jagannathan, Ram
    Rajagopalan, Kanya
    Hogan, Julien
    Hart, Allyson
    Newell, Kenneth A.
    Pastan, Stephen O.
    Patzer, Rachel E.
    INTERNATIONAL JOURNAL OF NEPHROLOGY AND RENOVASCULAR DISEASE, 2021, 14 : 97 - 104
  • [4] Large-scale genome-wide association studies reveal the genetic causal etiology between air pollutants and autoimmune diseases
    Wen, Jie
    Zhang, Jingwei
    Zhang, Hao
    Zhang, Nan
    Lei, Ruoyan
    Deng, Yujia
    Cheng, Quan
    Li, He
    Luo, Peng
    JOURNAL OF TRANSLATIONAL MEDICINE, 2024, 22 (01)
  • [5] The association between urinary metabolites of polycyclic aromatic hydrocarbons (PAHs) and cardiovascular diseases and blood pressure: a systematic review and meta-analysis of observational studies
    Mirzababaei, Atieh
    Daneshzad, Elnaz
    Moradi, Sajjad
    Abaj, Faezeh
    Mehranfar, Sanaz
    Asbaghi, Omid
    Clark, Cain C. T.
    Mirzaei, Khadijeh
    ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 2022, 29 (02) : 1712 - 1728