The Conserved Splicing Factor SUA Controls Alternative Splicing of the Developmental Regulator ABI3 in Arabidopsis

被引:107
|
作者
Sugliani, Matteo [1 ]
Brambilla, Vittoria [1 ]
Clerkx, Emile J. M. [2 ]
Koornneef, Maarten [1 ,2 ]
Soppe, Wim J. J. [1 ]
机构
[1] Max Planck Inst Plant Breeding Res, Dept Genet & Plant Breeding, D-50829 Cologne, Germany
[2] Wageningen Univ, Genet Lab, NL-6708 PB Wageningen, Netherlands
关键词
MESSENGER-RNA; PROTEIN; GENE; THALIANA; DOMAIN; EXPRESSION; INTERACT; COMPLEX; PLANTS; TRANSFORMATION;
D O I
10.1105/tpc.110.074674
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
ABSCISIC ACID INSENSITIVE3 (ABI3) is a major regulator of seed maturation in Arabidopsis thaliana. We detected two ABI3 transcripts, ABI3-alpha and ABI3-beta, which encode full-length and truncated proteins, respectively. Alternative splicing of ABI3 is developmentally regulated, and the ABI3-beta transcript accumulates at the end of seed maturation. The two ABI3 transcripts differ by the presence of a cryptic intron in ABI3-alpha, which is spliced out in ABI3-beta. The suppressor of abi3-5 (sua) mutant consistently restores wild-type seed features in the frameshift mutant abi3-5 but does not suppress other abi3 mutant alleles. SUA is a conserved splicing factor, homologous to the human protein RBM5, and reduces splicing of the cryptic ABI3 intron, leading to a decrease in ABI3-beta transcript. In the abi3-5 mutant, ABI3-beta codes for a functional ABI3 protein due to frameshift restoration.
引用
收藏
页码:1936 / 1946
页数:11
相关论文
共 45 条
  • [21] Alternative Splicing of CIPK3 Results in Distinct Target Selection to Propagate ABA Signaling in Arabidopsis
    Sanyal, Sibaji K.
    Kanwar, Poonam
    Samtani, Harsha
    Kaur, Kanwaljeet
    Jha, Saroj K.
    Pandey, Girdhar K.
    FRONTIERS IN PLANT SCIENCE, 2017, 8
  • [22] Best evidence linking the extracellular factor TGF-(3 to cancer-associated alternative splicing programs
    Alli-Oke, Opeoluwa
    Brosseau, Jean-Philippe
    BBA ADVANCES, 2025, 7
  • [23] METTL3-Mediated m6A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL
    Wu, Yiming
    Jin, Meiling
    Fernandez, Mike
    Hart, Kevyn L.
    Liao, Aijun
    Ge, Xinzhou
    Fernandes, Stacey M.
    McDonald, Tinisha
    Chen, Zhenhua
    Roth, Daniel
    Ghoda, Lucy Y.
    Marcucci, Guido
    Kalkum, Markus
    Pillai, Raju K.
    V. Danilov, Alexey
    Li, Jingyi Jessica
    Chen, Jianjun
    Brown, Jennifer R.
    Rosen, Steven T.
    Siddiqi, Tanya
    Wang, Lili
    BLOOD CANCER DISCOVERY, 2023, 4 (03): : 228 - 245
  • [24] RNA splicing regulator EIF3D regulates the tumor microenvironment through immunogene-related alternative splicing in head and neck squamous cell carcinoma
    Lu, Dandan
    Mihoayi, Mijti
    Ablikim, Yimin
    Arikin, Abdeyrim
    AGING-US, 2024, 16 (07): : 5929 - 5948
  • [25] Alternative polyadenylation dependent function of splicing factor SRSF3 contributes to cellular senescence
    Shen, Ting
    Li, Huan
    Song, Yifang
    Li, Li
    Lin, Jinzhong
    Wei, Gang
    Ni, Ting
    AGING-US, 2019, 11 (05): : 1356 - 1388
  • [26] Splicing factor SF3B1K700E mutant dysregulates erythroid differentiation via aberrant alternative splicing of transcription factor TAL1
    Jin, Shuiling
    Su, Hairui
    Ngoc-Tung Tran
    Song, Jing
    Lu, Sydney S.
    Li, Ying
    Huang, Suming
    Abdel-Wahab, Omar
    Liu, Yanyan
    Zhao, Xinyang
    PLOS ONE, 2017, 12 (05):
  • [27] Negative Regulation of Interferon-β Production by Alternative Splicing of Tumor Necrosis Factor Receptor-Associated Factor 3 in Ducks
    Wei, Xiaoqin
    Qian, Wei
    Sizhu, Suolang
    Li, Yongtao
    Guo, Kelei
    Jin, Meilin
    Zhou, Hongbo
    FRONTIERS IN IMMUNOLOGY, 2018, 9
  • [28] Alternative Splicing of FOXP3 Controls Regulatory T Cell Effector Functions and Is Associated With Human Atherosclerotic Plaque Stability
    Joly, Anne-Laure
    Seitz, Christina
    Liu, Sang
    Kuznetsov, Nikolai V.
    Gertow, Karl
    Westerberg, Lisa S.
    Paulsson-Berne, Gabrielle
    Hansson, Goran K.
    Andersson, John
    CIRCULATION RESEARCH, 2018, 122 (10) : 1385 - 1394
  • [29] Splicing factor SRSF1 controls autoimmune-related molecular pathways in regulatory T cells distinct from FoxP3
    Cassidy, Michael F.
    Herbert, Zachary T.
    Moulton, Vaishali R.
    MOLECULAR IMMUNOLOGY, 2022, 152 : 140 - 152
  • [30] RUG3 and ATM synergistically regulate the alternative splicing of mitochondrial nad2 and the DNA damage response in Arabidopsis thaliana
    Su, Chao
    Zhao, Hongtao
    Zhao, Yankun
    Ji, Hongtao
    Wang, Youning
    Zhi, Liya
    Li, Xia
    SCIENTIFIC REPORTS, 2017, 7