ZMYND8 Reads the Dual Histone Mark H3K4me1-H3K14ac to Antagonize the Expression of Metastasis-Linked Genes

被引:107
|
作者
Li, Na [1 ]
Li, Yuanyuan [2 ,3 ]
Lv, Jie [4 ,5 ,6 ]
Zheng, Xiangdong [2 ,3 ]
Wen, Hong [7 ]
Shen, Hongjie [8 ,9 ]
Zhu, Guangjing [10 ]
Chen, Tsai-Yu [1 ]
Dhar, Shilpa S. [1 ]
Kan, Pu-Yeh [1 ]
Wang, Zhibin [10 ]
Shiekhattar, Ramin [11 ]
Shi, Xiaobing [7 ]
Lan, Fei [8 ,9 ]
Chen, Kaifu [4 ,5 ,6 ]
Li, Wei [12 ,13 ]
Li, Haitao [2 ,3 ,14 ]
Lee, Min Gyu [1 ,15 ]
机构
[1] Univ Texas MD Anderson Canc Ctr, Dept Mol & Cellular Oncol, 1515 Holcombe Blvd, Houston, TX 77030 USA
[2] Tsinghua Univ, Dept Basic Med Sci, Beijing Adv Innovat Ctr Struct Biol, MOE Key Lab Prot Sci,Sch Med, Beijing 100084, Peoples R China
[3] Tsinghua Univ, Tsinghua Peking Ctr Life Sci, Beijing 100084, Peoples R China
[4] Methodist Hosp, Res Inst, Inst Acad Med, Houston, TX 77030 USA
[5] Methodist Hosp, Dept Cardiovasc Sci, Ctr Cardiovasc Regenerat, Res Inst, Houston, TX 77030 USA
[6] Cornell Univ, Weill Cornell Med Coll, New York, NY 10065 USA
[7] Univ Texas MD Anderson Canc Ctr, Dept Epigenet & Mol Carcinogenesis, 1515 Holcombe Blvd, Houston, TX 77030 USA
[8] Fudan Univ, Inst Biomed Sci, Key Lab Epigenet, Childrens Hosp, Shanghai 201102, Peoples R China
[9] Fudan Univ, Childrens Hosp, Key Lab Birth Defect, Shanghai 201102, Peoples R China
[10] Johns Hopkins Univ, Bloomberg Sch Publ Hlth, Dept Environm Hlth Sci, Baltimore, MD 21205 USA
[11] Univ Miami, Miller Sch Med, Sylvester Comprehens Canc Ctr, Dept Human Genet, Biomed Res Bldg,1501 NW 10th Ave, Miami, FL 33136 USA
[12] Baylor Coll Med, Dan L Duncan Canc Ctr, Div Biostat, One Baylor Plaza, Houston, TX 77030 USA
[13] Baylor Coll Med, Dept Mol & Cellular Biol, One Baylor Plaza, Houston, TX 77030 USA
[14] Sichuan Univ, West China Hosp, Collaborat Innovat Ctr Biotherapy, Chengdu 610041, Peoples R China
[15] Univ Texas Grad Sch Biomed Sci Houston, Canc Biol Program, Houston, TX 77030 USA
基金
中国国家自然科学基金; 中国博士后科学基金;
关键词
TUMOR-METASTASIS; HUMAN GENOME; DNA-DAMAGE; STEM-CELLS; TANDEM PHD; METHYLATION; CANCER; H3; TRANSCRIPTION; ACETYLATION;
D O I
10.1016/j.molcel.2016.06.035
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Histone acetylation, including acetylated H3K14 (H3K14ac), is generally linked to gene activation. Monomethylated histone H3 lysine 4 (H3K4me1), together with other gene-activating marks, denotes active genes. In contrast to usual gene-activating functions of H3K14ac and H3K4me1, we here show that the dual histone modification mark H3K4me1-H3K14ac is recognized by ZMYND8 (also called RACK7) and can function to counteract gene expression. We identified ZMYND8 as a transcriptional corepressor of the H3K4 demethylase JARID1D. ZMYND8 antagonized the expression of metastasis-linked genes, and its knockdown increased the cellular invasiveness in vitro and in vivo. The plant homeodomain (PHD) and Bromodomain cassette in ZMYND8 mediated the combinatorial recognition of H3K4me1-H3K14ac and H3K4me0-H3K14ac by ZMYND8. These findings uncover an unexpected role for the signature H3K4me1-H3K14ac in attenuating gene expression and reveal a metastasis-suppressive epigenetic mechanism in which ZMYND8's PHD-Bromo cassette couples H3K4me1-H3K14ac with downregulation of metastasis-linked genes.
引用
收藏
页码:470 / 484
页数:15
相关论文
共 50 条
  • [1] The dynamic broad epigenetic (H3K4me3, H3K27ac) domain as a mark of essential genes
    Beacon, Tasnim H.
    Delcuve, Genevieve P.
    Lopez, Camila
    Nardocci, Gino
    Kovalchuk, Igor
    van Wijnen, Andre J.
    Davie, James R.
    CLINICAL EPIGENETICS, 2021, 13 (01)
  • [2] H3K4me3, H3K9ac, H3K27ac, H3K27me3 and H3K9me3 Histone Tags Suggest Distinct Regulatory Evolution of Open and Condensed Chromatin Landmarks
    Igolkina, Anna A.
    Zinkevich, Arsenii
    Karandasheva, Kristina O.
    Popov, Aleksey A.
    Selifanova, Maria, V
    Nikolaeva, Dania
    Tkachev, Victor
    Penzar, Dmitry
    Nikitin, Daniil M.
    Buzdin, Anton
    CELLS, 2019, 8 (09)
  • [3] NASP antagonize chromatin accessibility through maintaining histone H3K9me1 in hepatocellular carcinoma
    Kang, Xuan
    Feng, Yun
    Gan, Zhixue
    Zeng, Shiyang
    Guo, Xiaobo
    Chen, Xirui
    Zhang, Ye
    Wang, Chen
    Liu, Kuinan
    Chen, Xuelin
    Jiang, Xiaoxue
    Song, Shuting
    Li, Yabin
    Chen, Su
    Sun, Feng
    Mao, Zhiyong
    Yang, Xiaomei
    Chang, Jianfeng
    BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE, 2018, 1864 (10): : 3438 - 3448
  • [4] Genetically encoded epigenetic sensors for visualization of H3K9me3, H3K9ac and H3K4me1 histone modifications in living cells
    Stepanov, Afanasii I.
    Putlyaeva, Lidia, V
    Besedovskaya, Zlata
    Shuvaeva, Alexandra A.
    Karpenko, Nikita, V
    Rukh, Shah
    Gorbachev, Dmitry A.
    Malyshevskaia, Kseniia K.
    Terskikh, Alexey, V
    Lukyanov, Konstantin A.
    Gurskaya, Nadya G.
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2024, 733
  • [5] Expression of Ribosomal RNA and Protein Genes in Human Embryonic Stem Cells Is Associated With the Activating H3K4me3 Histone Mark
    Zaidi, Sayyed K.
    Boyd, Joseph R.
    Grandy, Rodrigo A.
    Medina, Ricardo
    Lian, Jane B.
    Stein, Gary S.
    Stein, Janet L.
    JOURNAL OF CELLULAR PHYSIOLOGY, 2016, 231 (09) : 2007 - 2013
  • [6] The Expression of H3K9Ac, H3K14Ac, and H4K20TriMe in Epithelial Ovarian Tumors and the Clinical Significance
    Li Zhen
    Lin Gui-lan
    Yan Ping
    Huang Jin
    Wang Ya-li
    INTERNATIONAL JOURNAL OF GYNECOLOGICAL CANCER, 2010, 20 (01) : 82 - 86
  • [7] Histone H3K4me1 and H3K27ac play roles in nucleosome eviction and eRNA transcription, respectively, at enhancers
    Kang, Yujin
    Kim, Yea Woon
    Kang, Jin
    Kim, AeRi
    FASEB JOURNAL, 2021, 35 (08)
  • [8] H3K4me3 recognition by the COMPASS complex facilitates the restoration of this histone mark following DNA replication
    Serra-Cardona, Albert
    Duan, Shoufu
    Yu, Chuanhe
    Zhang, Zhiguo
    SCIENCE ADVANCES, 2022, 8 (18)
  • [9] Hdac3, Setdb1, and Kap1 mark H3K9me3/H3K14ac bivalent regions in young and aged liver
    Price, Andrew J.
    Manjegowda, Mohan C.
    Kain, Jessica
    Anandh, Swetha
    Bochkis, Irina M.
    AGING CELL, 2020, 19 (02)
  • [10] Histone H3 lysine 4 monomethylation (H3K4me1) and H3 lysine 9 monomethylation (H3K9me1): Distribution and their association in regulating gene expression under hyperglycaemic/hyperinsulinemic conditions in 3T3 cells
    Gupta, Jeena
    Kumar, Sandeep
    Li, Juntao
    Karuturi, R. Krishna Murthy
    Tikoo, Kulbhushan
    BIOCHIMIE, 2012, 94 (12) : 2656 - 2664