Phylogenetic analysis ofAnguilla marmoratapopulation in Thua Thien Hue, Vietnam based on the cytochrome C oxidase I (COI) gene fragments

被引:4
作者
Huyen, Kieu Thi [1 ]
Linh, Nguyen Quang [1 ,2 ]
机构
[1] Hue Univ, Univ Agr & Forestry, Fac Fisheries, 102 Phung Hung, Hue 49000, Vietnam
[2] Hue Univ, Inst Biotechnol, Dept Nutr Dis & Syst Livestock & Aquaculture, Hue City 49000, Vietnam
关键词
Anguilla marmorata; Nucleotides; Animo acids; Phylogenetic tree; GIANT MOTTLED EEL; FRESH-WATER EELS; ANGUILLA-MARMORATA; POPULATION-STRUCTURE; DNA; MIGRATION; EVOLUTION; ATLANTIC; TAXONOMY;
D O I
10.1186/s13568-020-01059-7
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The giant mottled eel is a species with high commercial value so overfishing, river management, and water pollution have negatively affected its movement and population numbers.Anguilla marmorata(eel) was listed in the Vietnam Red Data Book 2007 with a description of Vulnerability. This study used a barcode technique to analyze molecular characteristics and build genetic plants based on the cytochrome c oxidase I gene segment isolated from the mitochondrial genome of 48 individuals ofA. marmoratacollected in five different ecological regions of Thua Thien Hue, Vietnam. The isolated the cytochrome c oxidase I sequence has a length of 843 nucleotides, four base nucleotides of 30.03% Thymine, 25.15% Cytosine, 27.49% Adenine, and 17.43% Guanine. The percentage of Guanine + Cytosine content (42.58%) is acceptable, lower than the Adenine + Thymine content. The replacement capacity of Adenine and Guanine is 22.45% highest, the ratio between Thymine and Guanine; Cytosine and Guanine are the lowest at 2.72%. The establishment of genetically modified plants has shown the high genetic similarity of individuals in eel populations in Thua Thien Hue. The population ofAnguilla marmorataeels in Thua Thien Hue, Vietnam is divided into two separate groups that are guided by the migration process and specific ecological. This is particularly important in building strategies to conserve and develop the gene for eel in Vietnam and Thua Thien Hue.
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页数:8
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