The recent availability of X-ray structures for diverse ligand-bound Family A G protein-coupled receptors (GPCRs) in multiple conformations (inactive form with an antagonist/inverse agonist bound and active form with an agonist bound) now enables rational drug design efforts that have historically been applied to soluble enzyme targets. Here, we review properties of these GPCR binding sites, using a unique combination of calculated physicochemical properties and water energetics (GRID, Water Map and SZMAP) to provide a new perspective and rational assessment of druggability for each GPCR target binding site. Examples are described from several well-studied enzyme systems to support this advanced structure-based approach to assessing druggability and to contrast their properties with those of GPCRs. Changes in receptor conformations between the GPCR inactive and active forms evident from the protein structures are discussed, yielding important pointers for rational drug design of antagonists and agonists and a better understanding of GPCR activation.
Ballesteros J. A., 1995, Neuroscience Methods, V25, P366, DOI [10.1016/S1043-9471(05)80049-7, DOI 10.1016/S1043-9471(05)80049-7, DOI 10.1016/S1043-9471]
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Chien, Ellen Y. T.
;
Liu, Wei
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h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Liu, Wei
;
Zhao, Qiang
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机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Zhao, Qiang
;
Katritch, Vsevolod
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Univ Calif San Diego, Skaggs Sch Pharm & Pharmaceut Sci, La Jolla, CA 92093 USA
Univ Calif San Diego, San Diego Supercomp Ctr, La Jolla, CA 92093 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Katritch, Vsevolod
;
Han, Gye Won
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h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Han, Gye Won
;
Hanson, Michael A.
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机构:
Receptos, San Diego, CA 92121 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Hanson, Michael A.
;
Shi, Lei
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h-index: 0
机构:
Cornell Univ, Weill Cornell Med Coll, Dept Physiol & Biophys, New York, NY 10021 USA
Cornell Univ, Weill Cornell Med Coll, HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsau, New York, NY 10021 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Shi, Lei
;
Newman, Amy Hauck
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Natl Inst Drug Abuse, Med Chem Sect, Intramural Res Program, Baltimore, MD 21224 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Newman, Amy Hauck
;
Javitch, Jonathan A.
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h-index: 0
机构:
Columbia Univ Coll Phys & Surg, Ctr Mol Recognit, New York, NY 10032 USA
Columbia Univ Coll Phys & Surg, Dept Psychiat, New York, NY 10032 USA
Columbia Univ Coll Phys & Surg, Dept Pharmacol, New York, NY 10032 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Javitch, Jonathan A.
;
Cherezov, Vadim
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h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Cherezov, Vadim
;
Stevens, Raymond C.
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h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Ballesteros J. A., 1995, Neuroscience Methods, V25, P366, DOI [10.1016/S1043-9471(05)80049-7, DOI 10.1016/S1043-9471(05)80049-7, DOI 10.1016/S1043-9471]
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Chien, Ellen Y. T.
;
Liu, Wei
论文数: 0引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Liu, Wei
;
Zhao, Qiang
论文数: 0引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Zhao, Qiang
;
Katritch, Vsevolod
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Skaggs Sch Pharm & Pharmaceut Sci, La Jolla, CA 92093 USA
Univ Calif San Diego, San Diego Supercomp Ctr, La Jolla, CA 92093 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Katritch, Vsevolod
;
Han, Gye Won
论文数: 0引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Han, Gye Won
;
Hanson, Michael A.
论文数: 0引用数: 0
h-index: 0
机构:
Receptos, San Diego, CA 92121 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Hanson, Michael A.
;
Shi, Lei
论文数: 0引用数: 0
h-index: 0
机构:
Cornell Univ, Weill Cornell Med Coll, Dept Physiol & Biophys, New York, NY 10021 USA
Cornell Univ, Weill Cornell Med Coll, HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsau, New York, NY 10021 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Shi, Lei
;
Newman, Amy Hauck
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Drug Abuse, Med Chem Sect, Intramural Res Program, Baltimore, MD 21224 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Newman, Amy Hauck
;
Javitch, Jonathan A.
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ Coll Phys & Surg, Ctr Mol Recognit, New York, NY 10032 USA
Columbia Univ Coll Phys & Surg, Dept Psychiat, New York, NY 10032 USA
Columbia Univ Coll Phys & Surg, Dept Pharmacol, New York, NY 10032 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Javitch, Jonathan A.
;
Cherezov, Vadim
论文数: 0引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Cherezov, Vadim
;
Stevens, Raymond C.
论文数: 0引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USAScripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA