Metagenomes from two microbial consortia associated with Santa Barbara seep oil

被引：11

作者：

Hawley, Erik R. ^{[1
]}

Malfatti, Stephanie A. ^{[2
]}

Pagani, Ioanna ^{[3
]}

Huntemann, Marcel ^{[3
]}

Chen, Amy ^{[3
]}

Foster, Brian ^{[3
]}

Copeland, Alexander ^{[3
]}

del Rio, Tijana Glavina ^{[3
]}

Pati, Amrita ^{[3
]}

Jansson, Janet R. ^{[3
,4
]}

Gilbert, Jack A. ^{[5
,6
]}

Tringe, Susannah Green ^{[3
,4
]}

Lorenson, Thomas D. ^{[7
]}

Hess, Matthias ^{[1
,3
,8
,9
]}

机构：

[1] Washington State Univ, Richland, WA 99354 USA

[2] Lawrence Livermore Natl Lab, Biosci & Biotechnol Div, Livermore, CA USA

[3] DOE Joint Genome Inst, Walnut Creek, CA USA

[4] Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Berkeley, CA 94720 USA

[5] Argonne Natl Lab, Lemont, IL USA

[6] Univ Chicago, Chicago, IL 60637 USA

[7] US Geol Survey, Menlo Pk, CA 94025 USA

[8] Pacific NW Natl Lab, Chem & Biol Proc Dev Grp, Richland, WA 99352 USA

[9] Environm Mol Sci Lab, Richland, WA USA

来源：

MARINE GENOMICS | 2014年 / 18卷

关键词：

Bioremediation; Hydrocarbon degradation; Marine ecosystem; Metagenomics; Natural oil seeps;

D O I：

10.1016/j.margen.2014.06.003

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The metagenomes from two microbial consortia associated with natural oils seeping into the Pacific Ocean offshore the coast of Santa Barbara (California, USA) were determined to complement already existing metagenomes generated from microbial communities associated with hydrocarbons that pollute the marine ecosystem. This genomics resource article is the first of two publications reporting a total of four new metagenomes from oils that seep into the Santa Barbara Channel. (C) 2014 Elsevier B.V. All rights reserved.

引用

页码：97 / 99

页数：3

共 15 条

[1] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].