chromosome;
chromosome-specific DNA library;
microdissection;
Populus tremula;
D O I:
10.1007/BF02772703
中图分类号:
Q5 [生物化学];
学科分类号:
071010 ;
081704 ;
摘要:
A method for single-chromosome microdissection and microcloning was established in forest plants using poplar (Populus tremula) as a model. By use of meristernatic cell division in root tip and the wall degradation hypotonic method, well-spread poplar metaphase chromosome spreads showing low contamination were quickly prepared and fitted for chromosome microdissection. An individual chromosome 1 was microdissected from the metaphase spreads of poplar root-tip cells with a fine glass needle controlled by a micromanipulator. The dissected chromosome was amplified in vitro by the Sau3A linker adaptor-mediated PCR technique, by which 200- to 3000-bp smear DNA fragments were obtained. Southern hybridization results showed that the PCR products from the single poplar chromosome were homogeneous with poplar genomic DNA, indicating that DNA from the single chromosome has been Successfully amplified. Next, the second-round PCR products from the single chromosome I were cloned into T-easy vectors to generate a DNA library of the chromosome 1. About 3 x 10(5) recombinant clones were obtained. Evaluation based on 160 randomly selected clones showed that the sizes of the cloned inserts varied from 230-2200 bp, with an average of 800 bp. Therefore, this research suggests that microdissection and microcloning of single small chromosomes in forest plants is feasible.
机构:
Univ Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Univ Georgia, Dept Genet, Athens, GA 30602 USA
Univ Georgia, Dept Plant Biol, Athens, GA 30602 USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Zhou, Ran
Jenkins, Jerry W.
论文数: 0引用数: 0
h-index: 0
机构:
HudsonAlpha Inst Biotechnol, Huntsville, AL USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Jenkins, Jerry W.
Zeng, Yibing
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h-index: 0
机构:
Univ Georgia, Dept Genet, Athens, GA 30602 USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Zeng, Yibing
Shu, Shengqiang
论文数: 0引用数: 0
h-index: 0
机构:
Lawrence Berkeley Natl Lab, DOE Joint Genome Inst, Berkeley, CA USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Shu, Shengqiang
Jang, Hosung
论文数: 0引用数: 0
h-index: 0
机构:
Univ Georgia, Dept Genet, Athens, GA 30602 USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Jang, Hosung
Harding, Scott A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Univ Georgia, Dept Genet, Athens, GA 30602 USA
Univ Georgia, Dept Plant Biol, Athens, GA 30602 USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Harding, Scott A.
Williams, Melissa
论文数: 0引用数: 0
h-index: 0
机构:
HudsonAlpha Inst Biotechnol, Huntsville, AL USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Williams, Melissa
Plott, Christopher
论文数: 0引用数: 0
h-index: 0
机构:
HudsonAlpha Inst Biotechnol, Huntsville, AL USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Plott, Christopher
Barry, Kerrie W.
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h-index: 0
机构:
Lawrence Berkeley Natl Lab, DOE Joint Genome Inst, Berkeley, CA USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Barry, Kerrie W.
Koriabine, Maxim
论文数: 0引用数: 0
h-index: 0
机构:
Lawrence Berkeley Natl Lab, DOE Joint Genome Inst, Berkeley, CA USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Koriabine, Maxim
Amirebrahimi, Mojgan
论文数: 0引用数: 0
h-index: 0
机构:
Lawrence Berkeley Natl Lab, DOE Joint Genome Inst, Berkeley, CA USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Amirebrahimi, Mojgan
Talag, Jayson
论文数: 0引用数: 0
h-index: 0
机构:
Univ Arizona, Arizona Genom Inst, Sch Plant Sci, Tucson, AZ USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Talag, Jayson
Rajasekar, Shanmugam
论文数: 0引用数: 0
h-index: 0
机构:
Univ Arizona, Arizona Genom Inst, Sch Plant Sci, Tucson, AZ USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Rajasekar, Shanmugam
Grimwood, Jane
论文数: 0引用数: 0
h-index: 0
机构:
HudsonAlpha Inst Biotechnol, Huntsville, AL USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Grimwood, Jane
Schmitz, Robert J.
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h-index: 0
机构:
Univ Georgia, Dept Genet, Athens, GA 30602 USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Schmitz, Robert J.
Dawe, R. Kelly
论文数: 0引用数: 0
h-index: 0
机构:
Univ Georgia, Dept Genet, Athens, GA 30602 USA
Univ Georgia, Dept Plant Biol, Athens, GA 30602 USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Dawe, R. Kelly
Schmutz, Jeremy
论文数: 0引用数: 0
h-index: 0
机构:
HudsonAlpha Inst Biotechnol, Huntsville, AL USA
Lawrence Berkeley Natl Lab, DOE Joint Genome Inst, Berkeley, CA USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Schmutz, Jeremy
Tsai, Chung-Jui
论文数: 0引用数: 0
h-index: 0
机构:
Univ Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA
Univ Georgia, Dept Genet, Athens, GA 30602 USA
Univ Georgia, Dept Plant Biol, Athens, GA 30602 USAUniv Georgia, Sch Forestry & Nat Resources, Athens, GA 30602 USA