Mapping lipid and detergent molecules at the surface of membrane proteins

被引:5
|
作者
Cogdell, Richard J. [1 ]
Gardiner, Alastair T. [1 ]
Roszak, Aleksander W. [2 ]
Stoncius, Sigitas [3 ]
Kocovsky, Pavel [3 ]
Isaacs, Neil W. [2 ]
机构
[1] Glasgow Biomed Res Ctr, Coll Med Vet & Life Sci, Inst Mol Cell & Syst Biol, Glasgow G12 8TA, Lanark, Scotland
[2] Univ Glasgow, Glasgow Biomed Res Ctr, Dept Chem, Glasgow G12 8TA, Lanark, Scotland
[3] Univ Glasgow, Dept Chem, Glasgow G12 8QQ, Lanark, Scotland
基金
英国生物技术与生命科学研究理事会; 英国惠康基金;
关键词
annular lipid; detergent; heavy atom; phospholipid; photosynthetic bacterium; X-ray crystallography; RHODOBACTER-SPHAEROIDES;
D O I
10.1042/BST0390775
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Electron-density maps for the crystal structures of membrane proteins often show features suggesting binding of lipids and/or detergent molecules on the hydrophobic surface, but usually it is difficult to identify the bound molecules. In our studies, heavy-atom-labelled phospholipids and detergents have been used to unequivocally identify these binding sites at the surfaces of test membrane proteins, the reaction centres from Rhodobacter sphaeroides and Blastochloris viridis. The generality of this method is discussed in the present article.
引用
收藏
页码:775 / 779
页数:5
相关论文
共 50 条
  • [1] Insights into the mechanism of high lipid-detergent crystallization of membrane proteins
    Trampari, Sofia
    Neumann, Caroline
    Hjorth-Jensen, Samuel J.
    Shahsavar, Azadeh
    Quistgaard, Esben M.
    Nissen, Poul
    JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2021, 54 : 1775 - 1783
  • [2] Influence of Detergent and Lipid Composition on Reconstituted Membrane Proteins for Structural Studies
    Mouhib, Mohammed
    Benediktsdottir, Andrea
    Nilsson, Caroline Svensson
    Chi, Celestine N.
    ACS OMEGA, 2021, 6 (38): : 24377 - 24381
  • [3] Mapping of the detergent-exposed surface of membrane proteins and peptides by 1H solution NMR in detergent: Application to the gramicidin A ion channel
    Michel Seigneuret
    Christine Le guernevé
    Journal of Biomolecular NMR, 1999, 13 : 31 - 41
  • [4] Mapping of the detergent-exposed surface of membrane proteins and peptides by 1H solution NMR in detergent:: Application to the gramicidin A ion channel
    Seigneuret, M
    Le Guernevé, C
    JOURNAL OF BIOMOLECULAR NMR, 1999, 13 (01) : 31 - 41
  • [5] Mapping the lipid-exposed surfaces of membrane proteins
    Arkin, IT
    MacKenzie, KR
    Fisher, L
    Aimoto, S
    Engelman, DM
    Smith, SO
    NATURE STRUCTURAL BIOLOGY, 1996, 3 (03): : 240 - 243
  • [6] A method for detergent-free isolation of membrane proteins in their local lipid environment
    Lee, Sarah C.
    Knowles, Tim J.
    Postis, Vincent L. G.
    Jamshad, Mohammed
    Parslow, Rosemary A.
    Lin, Yu-Pin
    Goldman, Adrian
    Sridhar, Pooja
    Overduin, Michael
    Muench, Stephen P.
    Dafforn, Timothy R.
    NATURE PROTOCOLS, 2016, 11 (07) : 1149 - 1162
  • [7] A method for detergent-free isolation of membrane proteins in their local lipid environment
    Sarah C Lee
    Tim J Knowles
    Vincent L G Postis
    Mohammed Jamshad
    Rosemary A Parslow
    Yu-pin Lin
    Adrian Goldman
    Pooja Sridhar
    Michael Overduin
    Stephen P Muench
    Timothy R Dafforn
    Nature Protocols, 2016, 11 : 1149 - 1162
  • [8] Helical net plots and lipid favourable surface mapping of transmembrane helices of integral membrane proteins: Aids to structure determination of integral membrane proteins
    Zloh, M
    Esposito, D
    Gibbons, WA
    INTERNET JOURNAL OF CHEMISTRY, 2003, 6 (02):
  • [9] Specific Lipid Binding of Membrane Proteins in Detergent Micelles Characterized by NMR and Molecular Dynamics
    Zhao, Linlin
    Wang, Shuqing
    Run, Changqing
    Bo OuYang
    Chou, James J.
    BIOCHEMISTRY, 2016, 55 (38) : 5317 - +
  • [10] SIZE AND DETERGENT BINDING OF MEMBRANE PROTEINS
    CLARKE, S
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1975, 250 (14) : 5459 - 5469