Cellular anatomy of the mouse primary motor cortex

被引:119
作者
Munoz-Castaneda, Rodrigo [1 ]
Zingg, Brian [2 ,3 ]
Matho, Katherine S. [1 ]
Chen, Xiaoyin [1 ,4 ]
Wang, Quanxin [4 ]
Foster, Nicholas N. [2 ,3 ]
Li, Anan [5 ,6 ]
Narasimhan, Arun [1 ]
Hirokawa, Karla E. [4 ,7 ]
Huo, Bingxing [1 ]
Bannerjee, Samik [1 ]
Korobkova, Laura [3 ]
Park, Chris Sin [8 ]
Park, Young-Gyun [9 ]
Bienkowski, Michael S. [3 ,10 ]
Chon, Uree [11 ]
Wheeler, Diek W. [12 ,13 ]
Li, Xiangning [5 ,6 ]
Wang, Yun [4 ]
Naeemi, Maitham [4 ]
Xie, Peng [14 ]
Liu, Lijuan [14 ]
Kelly, Kathleen [1 ]
An, Xu [1 ,15 ]
Attili, Sarojini M. [12 ,13 ]
Bowman, Ian [2 ,3 ]
Bludova, Anastasiia [1 ]
Cetin, Ali [4 ]
Ding, Liya [14 ]
Drewes, Rhonda [1 ]
D'Orazi, Florence [4 ]
Elowsky, Corey [1 ]
Fischer, Stephan [1 ]
Galbavy, William [1 ]
Gao, Lei [2 ,3 ]
Gillis, Jesse [1 ]
Groblewski, Peter A. [4 ]
Gou, Lin [2 ,3 ]
Hahn, Joel D. [16 ]
Hatfield, Joshua T. [1 ,15 ]
Hintiryan, Houri [2 ,3 ]
Huang, Junxiang Jason [17 ]
Kondo, Hideki [1 ]
Kuang, Xiuli [18 ]
Lesnar, Philip [4 ]
Li, Xu [1 ]
Li, Yaoyao [18 ]
Lin, Mengkuan [1 ]
Lo, Darrick [2 ,3 ]
Mizrachi, Judith [1 ]
机构
[1] Cold Spring Harbor Lab, POB 100, Cold Spring Harbor, NY 11724 USA
[2] Univ Calif Los Angeles, David Geffen Sch Med, Dept Neurobiol, Los Angeles, CA 90095 USA
[3] Univ Southern Calif, Keck Sch Med, USC Stevens Neuroimaging & Informat Inst INI, USC, Los Angeles, CA 90007 USA
[4] Allen Inst Brain Sci, Seattle, WA 98109 USA
[5] Huazhong Univ Sci & Technol, Britton Chance Ctr Biomed Photon, Wuhan Natl Lab Optoelect, MoE Key Lab Biomed Photon, Wuhan, Peoples R China
[6] JITRI, HUST Suzhou Inst Brainsmat, Suzhou, Peoples R China
[7] Cajal Neurosci, Seattle, WA 98102 USA
[8] Univ Calif Los Angeles, David Geffen Sch Med, Ctr Neurobehav Genet,Dept Psychiat & Biobehav Sci, Jane & Terry Semel Inst Neurosci & Human Behav, Los Angeles, CA 90095 USA
[9] MIT, Dept Chem Engn, Inst Med Engn & Sci, Picower Inst Learning & Memory, Cambridge, MA 02139 USA
[10] Univ Southern Calif, Keck Sch Med, USC, Dept Physiol & Neurosci,Zilkha Neurogenet Inst, Los Angeles, CA 90007 USA
[11] Penn State Univ, Coll Med, Dept Neural & Behav Sci, Hershey, PA USA
[12] George Mason Univ, Ctr Neural Informat Struct & Plast, Bioengn Dept, Fairfax, VA 22030 USA
[13] George Mason Univ, Krasnow Inst Adv Study, Fairfax, VA 22030 USA
[14] Southeast Univ, SEU ALLEN Joint Ctr, Inst Brain & Intelligence, Nanjing, Peoples R China
[15] Duke Univ, Sch Med, Dept Neurobiol, Durham, NC 27708 USA
[16] Univ Southern Calif, Dept Biol Sci, Los Angeles, CA 90007 USA
[17] Univ Southern Calif, Ctr Neural Circuits & Sensory Proc Disorders, Zilkha Neurogenet Inst ZNI, Dept Physiol & Neurosci,Keck Sch Med, Los Angeles, CA 90007 USA
[18] Wenzhou Med Univ, Sch Optometry & Ophthalmol, Wenzhou, Peoples R China
[19] Shanghai Univ, Sch Comp Engn & Sci, Shanghai, Peoples R China
[20] Univ Calif San Diego, Neurobiol Sect, Div Biol Sci, San Diego, CA 92103 USA
[21] Univ Penn, Dept Radiol, Philadelphia, PA 19104 USA
关键词
GABAERGIC NEURONS; DRIVER LINES; ORGANIZATION; RESOLUTION; INPUT; MICROSTIMULATION; CONNECTIVITY; TOMOGRAPHY; MORPHOLOGY; CONNECTOME;
D O I
10.1038/s41586-021-03970-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
An essential step toward understanding brain function is to establish a structural framework with cellular resolution on which multi-scale datasets spanning molecules, cells, circuits and systems can be integrated and interpreted(1). Here, as part of the collaborative Brain Initiative Cell Census Network (BICCN), we derive a comprehensive cell type-based anatomical description of one exemplar brain structure, the mouse primary motor cortex, upper limb area (MOp-ul). Usinggenetic and viral labelling, barcoded anatomy resolved by sequencing, single-neuron reconstruction, whole-brain imaging and cloud-based neuroinformaticstools, we delineated the MOp-ul in 3D and refined its sublaminar organization. We defined around two dozen projection neuron types in the MOp-ul and derived an inputoutput wiring diagram, which will facilitate future analyses of motor control circuitry across molecular, cellular and system levels. This work provides a roadmap towards a comprehensive cellular-resolution description of mammalian brain architecture.
引用
收藏
页码:159 / +
页数:45
相关论文
共 85 条
  • [1] Abramoff M. D., 2004, BIOPHOTONICS INT, V11, P36, DOI DOI 10.1201/9781420005615.AX4
  • [2] Ahrens MB, 2013, NAT METHODS, V10, P413, DOI [10.1038/nmeth.2434, 10.1038/NMETH.2434]
  • [3] A whole-brain atlas of monosynaptic input targeting four different cell types in the medial prefrontal cortex of the mouse
    Ahrlund-Richter, Sofie
    Xuan, Yang
    van Lunteren, Josina Anna
    Kim, Hoseok
    Ortiz, Cantin
    Dorocic, Iskra Pollak
    Meletis, Konstantinos
    Carlen, Marie
    [J]. NATURE NEUROSCIENCE, 2019, 22 (04) : 657 - +
  • [4] An open repository for single-cell reconstructions of the brain forest
    Akram, Masood A.
    Nanda, Sumit
    Maraver, Patricia
    Armananzas, Ruben
    Ascoli, Giorgio A.
    [J]. SCIENTIFIC DATA, 2018, 5
  • [5] Operations research methods for estimating the population size of neuron types
    Attili, Sarojini M.
    Mackesey, Sean T.
    Ascoli, Giorgio A.
    [J]. ANNALS OF OPERATIONS RESEARCH, 2020, 289 (01) : 33 - 50
  • [6] Fast unfolding of communities in large networks
    Blondel, Vincent D.
    Guillaume, Jean-Loup
    Lambiotte, Renaud
    Lefebvre, Etienne
    [J]. JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2008,
  • [7] BRAIN Initiative Cell Census Network (BICCN), 2021, NATURE, V598, P86, DOI [10.1038/s41586-021-03950-0(2021), DOI 10.1038/S41586-021-03950-0(2021)]
  • [8] TeraFly: real-time three-dimensional visualization and annotation of terabytes of multidimensional volumetric images
    Bria, Alessandro
    Iannello, Giulio
    Onofri, Leonardo
    Peng, Hanchuan
    [J]. NATURE METHODS, 2016, 13 (03) : 192 - 194
  • [9] Quantifying neuronal size: Summing up trees and splitting the branch difference
    Brown, Kerry M.
    Gillette, Todd A.
    Ascoli, Giorgio A.
    [J]. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 2008, 19 (06) : 485 - 493
  • [10] High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing
    Chen, Xiaoyin
    Sun, Yu-Chi
    Zhan, Huiqing
    Kebschull, Justus M.
    Fischer, Stephan
    Matho, Katherine
    Huang, Z. Josh
    Gillis, Jesse
    Zador, Anthony M.
    [J]. CELL, 2019, 179 (03) : 772 - +