Adaptive phase correction of diffusion-weighted images

被引:15
作者
Pizzolato, Marco [1 ]
Gilbert, Guillaume [2 ]
Thiran, Jean-Philippe [1 ,3 ,4 ]
Descoteaux, Maxime [5 ]
Deriche, Rachid [6 ]
机构
[1] Ecole Polytech Fed Lausanne, Signal Proc Lab LTS5, Lausanne, Switzerland
[2] Philips Healthcare Canada, MR Clin Sci, Markham, ON, Canada
[3] CHU Vaudois, Radiol Dept, Lausanne, Switzerland
[4] Univ Lausanne, Lausanne, Switzerland
[5] Univ Sherbrooke, SCIL, Sherbrooke, PQ, Canada
[6] Univ Cote Azur, Inria Sophia Antipolis Mediterranee, Nice, France
基金
瑞士国家科学基金会; 欧盟地平线“2020”;
关键词
Phase correction; Phase estimation; Oriented laplacian; Diffusion MRI; Rician noise; MAGNETIC-RESONANCE IMAGES; TO-NOISE RATIO; MR-IMAGES; FOURIER RECONSTRUCTION; ANISOTROPIC DIFFUSION; RICIAN NOISE; MAP-MRI; TENSOR; REGULARIZATION; FRAMEWORK;
D O I
10.1016/j.neuroimage.2019.116274
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Phase correction (PC) is a preprocessing technique that exploits the phase of images acquired in Magnetic Resonance Imaging (MRI) to obtain real-valued images containing tissue contrast with additive Gaussian noise, as opposed to magnitude images which follow a non-Gaussian distribution, e.g. Rician. PC finds its natural application to diffusion-weighted images (DWIs) due to their inherent low signal-to-noise ratio and consequent non-Gaussianity that induces a signal overestimation bias that propagates to the calculated diffusion indices. PC effectiveness depends upon the quality of the phase estimation, which is often performed via a regularization procedure. We show that a suboptimal regularization can produce alterations of the true image contrast in the real-valued phase-corrected images. We propose adaptive phase correction (APC), a method where the phase is estimated by using MRI noise information to perform a complex-valued image regularization that accounts for the local variance of the noise. We show, on synthetic and acquired data, that APC leads to phase-corrected real-valued DWIs that present a reduced number of alterations and a reduced bias. The substantial absence of parameters for which human input is required favors a straightforward integration of APC in MRI processing pipelines.
引用
收藏
页数:17
相关论文
共 74 条
[11]  
Chambolle A, 2004, J MATH IMAGING VIS, V20, P89
[12]   Nonlinear phase correction with an extended statistical algorithm [J].
Chang, Z ;
Xiang, QS .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2005, 24 (06) :791-798
[13]   A robust multi-shot scan strategy for high-resolution diffusion weighted MRI enabled by multiplexed sensitivity-encoding (MUSE) [J].
Chen, Nan-kuei ;
Guidon, Arnaud ;
Chang, Hing-Chiu ;
Song, Allen W. .
NEUROIMAGE, 2013, 72 :41-47
[14]   Complex diffusion-weighted image estimation via matrix recovery under general noise models [J].
Cordero-Grande, Lucilio ;
Christiaens, Daan ;
Hutter, Jana ;
Price, Anthony N. ;
Hajnal, Jo V. .
NEUROIMAGE, 2019, 200 :391-404
[15]   Chambolle's Projection Algorithm for Total Variation Denoising [J].
Duran, Joan ;
Coll, Bartomeu ;
Sbert, Catalina .
IMAGE PROCESSING ON LINE, 2013, 3 :311-331
[16]   Real diffusion-weighted MRI enabling true signal averaging and increased diffusion contrast [J].
Eichner, Cornelius ;
Cauley, Stephen F. ;
Cohen-Adad, Julien ;
Moeller, Harald E. ;
Turner, Robert ;
Setsompop, Kawin ;
Wald, Lawrence L. .
NEUROIMAGE, 2015, 122 :373-384
[17]   Denoising MRI Using Spectral Subtraction [J].
Ertuerk, M. Arcan ;
Bottomley, Paul A. ;
El-Sharkawy, AbdEl-Monem M. .
IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2013, 60 (06) :1556-1562
[18]  
Ferrero G., 2016, STAT ANAL NOISE MRI
[19]   MAPL: Tissue microstructure estimation using Laplacian- regularized MAP-MRI and its application to HCP data [J].
Fick, Rutger H. J. ;
Wassermann, Demian ;
Caruyer, Emmanuel ;
Deriche, Rachid .
NEUROIMAGE, 2016, 134 :365-385
[20]   Methods for choosing the regularization parameter and estimating the noise variance in image restoration and their relation [J].
Galatsanos, Nikolas P. ;
Katsaggelos, Aggelos K. .
IEEE TRANSACTIONS ON IMAGE PROCESSING, 1992, 1 (03) :322-336