Technical desiderata for the integration of genomic data into Electronic Health Records

被引:68
作者
Masys, Daniel R. [1 ]
Jarvik, Gail P. [2 ,3 ]
Abernethy, Neil F. [1 ]
Anderson, Nicholas R. [1 ]
Papanicolaou, George J. [4 ]
Paltoo, Dina N. [5 ]
Hoffman, Mark A. [6 ]
Kohane, Isaac S. [7 ]
Levy, Howard P. [8 ,9 ]
机构
[1] Univ Washington, Dept Med Educ & Biomed Informat, Div Biomed & Hlth Informat, Seattle, WA 98195 USA
[2] Univ Washington, Dept Med, Div Med Genet, Seattle, WA 98195 USA
[3] Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
[4] NHLBI, Div Prevent & Populat Sci, NIH, Bethesda, MD 20892 USA
[5] NHLBI, Adv Technol & Surg Branch, Div Cardiovasc Sci, NIH, Bethesda, MD 20892 USA
[6] Cemer Corp, Kansas City, MO USA
[7] MIT, Harvard Mit Div Hlth Sci & Technol, Cambridge, MA 02139 USA
[8] Johns Hopkins Univ, Div Gen Internal Med, Baltimore, MD USA
[9] Johns Hopkins Univ, McKusick Nathans Inst Genet Med, Baltimore, MD USA
关键词
Electronic Health Records; Genomics; Knowledge representation; Data compression; CARE; SEQUENCE;
D O I
10.1016/j.jbi.2011.12.005
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
The era of "Personalized Medicine," guided by individual molecular variation in DNA, RNA, expressed proteins and other forms of high volume molecular data brings new requirements and challenges to the design and implementation of Electronic Health Records (EHRs). In this article we describe the characteristics of biomolecular data that differentiate it from other classes of data commonly found in EHRs, enumerate a set of technical desiderata for its management in healthcare settings, and of er a candidate technical approach to its compact and efficient representation in operational systems. (C) 2011 Elsevier Inc. All rights reserved.
引用
收藏
页码:419 / 422
页数:4
相关论文
共 50 条
  • [21] Data integration and genomic medicine
    Louie, Brenton
    Mork, Peter
    Martin-Sanchez, Fernando
    Halevy, Alon
    Tarczy-Hornoch, Peter
    JOURNAL OF BIOMEDICAL INFORMATICS, 2007, 40 (01) : 5 - 16
  • [22] Towards Improved Information Quality: The Integration of Body Area Network Data within Electronic Health Records
    O'Donoghue, John
    Herbert, John
    O'Reilly, Philip
    Sammon, David
    AMBIENT ASSISTIVE HEALTH AND WELLNESS MANAGEMENT IN THE HEART OF THE CITY, PROCEEDING, 2009, 5597 : 299 - +
  • [23] Achieving "Meaningful Use" of Electronic Health Records Through the Integration of the Nursing Management Minimum Data Set
    Westra, Bonnie L.
    Subramanian, Amarnath
    Hart, Colleen M.
    Matney, Susan A.
    Wilson, Patricia S.
    Huff, Stanley M.
    Huber, Diane L.
    Delaney, Connie W.
    JOURNAL OF NURSING ADMINISTRATION, 2010, 40 (7-8): : 336 - 343
  • [24] Designing a System for Patients Controlling Providers' Access to their Electronic Health Records: Organizational and Technical Challenges
    Leventhal, Jeremy C.
    Cummins, Jonathan A.
    Schwartz, Peter H.
    Martin, Douglas K.
    Tierney, William M.
    JOURNAL OF GENERAL INTERNAL MEDICINE, 2015, 30 : S17 - S24
  • [25] Big data and electronic health records for glaucoma research
    Bernstein, Isaac A.
    Fernandez, Karen S.
    Stein, Joshua D.
    Pershing, Suzann
    Wang, Sophia Y.
    TAIWAN JOURNAL OF OPHTHALMOLOGY, 2024, 14 (03) : 352 - 359
  • [26] Use of Data from Electronic Health Records for Pharmacoepidemiology
    Michael D. Murray
    Current Epidemiology Reports, 2014, 1 (4) : 186 - 193
  • [27] A Study Into the Impact of Data Breaches of Electronic Health Records
    Pilla, Ravi
    Oseni, Taiwo
    Stranieri, Andrew
    PROCEEDINGS OF 2023 AUSTRALIAN COMPUTER SCIENCE WEEK, ACSW 2023, 2023, : 252 - 254
  • [28] De-Identification of Electronic Health Records Data
    Borowik, Piotr
    Brylicki, Piotr
    Dzieciatko, Mariusz
    Jeda, Waldemar
    Leszewski, Lukasz
    Zajac, Piotr
    INFORMATION TECHNOLOGY IN BIOMEDICINE, 2019, 1011 : 325 - 337
  • [29] Merging Ontologies and Data from Electronic Health Records
    Calcagno, Salvatore
    Calvagna, Andrea
    Tramontana, Emiliano
    Verga, Gabriella
    FUTURE INTERNET, 2024, 16 (02)
  • [30] Family Relatives as Structured Data in Electronic Health Records
    Zhou, L.
    Lu, Y.
    Vitale, C. J.
    Mar, P. L.
    Chang, F.
    Dhopeshwarkar, N.
    Rocha, R. A.
    APPLIED CLINICAL INFORMATICS, 2014, 5 (02): : 349 - 367