Overview of research on fusion genes in prostate cancer

被引：4

作者：

Song, Chunjiao ^{[1
,2
]}

Chen, Huan ^{[3
]}

机构：

[1] Shaoxing Univ, Sch Med, Shaoxing Peoples Hosp, Med Res Ctr, Shaoxing 312000, Peoples R China

[2] Shaoxing Univ, Sch Med, Shaoxing Hosp, Shaoxing 312000, Peoples R China

[3] Zhejiang Inst Microbiol, Key Lab Microorganism Technol & Bioinformat Res Z, Hangzhou 310000, Peoples R China

来源：

TRANSLATIONAL CANCER RESEARCH | 2020年 / 9卷 / 03期

关键词：

Prostate cancer; fusion gene; biomarker; RNA-SEQ ANALYSIS; SEQUENCING REVEALS; RECURRENT FUSION; MESSENGER-RNA; CHIMERIC RNAS; REARRANGEMENTS; TRANSCRIPTION; IDENTIFICATION; TMPRSS2-ERG; DISCOVERY;

D O I：

10.21037/tcr.2020.01.34

中图分类号：

R73 [肿瘤学];

学科分类号：

100214 ;

摘要：

Fusion genes are known to drive and promote carcinogenesis and cancer progression. In recent years, the rapid development of biotechnologies has led to the discovery of a large number of fusion genes in prostate cancer specimens. To further investigate them, we summarized the fusion genes. We searched related articles in PubMed, CNKI (Chinese National Knowledge Infrastructure) and other databases, and the data of 92 literatures were summarized after preliminary screening. In this review, we summarized approximated 400 fusion genes since the first specific fusion TMPRSS2-ERG was discovered in prostate cancer in 2005. Some of these are prostate cancer specific, some are high-frequency in the prostate cancer of a certain ethnic group. This is a summary of scientific research in related fields and suggests that some fusion genes may become biomarkers or the targets for individualized therapies.

引用

页码：1998 / +

页数：15

共 90 条

[31] SOAPfuse: an algorithm for identifying fusion transcripts from paired-end RNA-Seq data [J].

Jia, Wenlong ;

Qiu, Kunlong ;

He, Minghui ;

Song, Pengfei ;

Zhou, Quan ;

Zhou, Feng ;

Yu, Yuan ;

Zhu, Dandan ;

Nickerson, Michael L. ;

Wan, Shengqing ;

Liao, Xiangke ;

Zhu, Xiaoqian ;

Peng, Shaoliang ;

Li, Yingrui ;

Wang, Jun ;

Guo, Guangwu .

GENOME BIOLOGY, 2013, 14 (02)

[32] Recurrent chimeric RNAs enriched in human prostate cancer identified by deep sequencing [J].

Kannan, Kalpana ;

Wang, Liguo ;

Wang, Jianghua ;

Ittmann, Michael M. ;

Li, Wei ;

Yen, Laising .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (22) :9172-9177

[33] TopHat-Fusion: an algorithm for discovery of novel fusion transcripts [J].

Kim, Daehwan ;

Salzberg, Steven L. .

GENOME BIOLOGY, 2011, 12 (08)

[34] Prevalence of chromosomal rearrangements involving non-ETS genes in prostate cancer [J].

Kluth, Martina ;

Galal, Rami ;

Krohn, Antje ;

Weischenfeldt, Joachim ;

Tsourlakis, Christina ;

Paustian, Lisa ;

Ahrary, Ramin ;

Ahmed, Malik ;

Scherzai, Sekander ;

Meyer, Anne ;

Sirma, Hueseyin ;

Korbel, Jan ;

Sauter, Guido ;

Schlomm, Thorsten ;

Simon, Ronald ;

Minner, Sarah .

INTERNATIONAL JOURNAL OF ONCOLOGY, 2015, 46 (04) :1637-1642

[35] GENETIC DETERMINANTS OF PROSTATE CANCER: A REVIEW [J].

Kral, Milan ;

Rosinska, Vlasta ;

Student, Vladimir ;

Grepl, Michal ;

Hrabec, Martin ;

Bouchal, Jan .

BIOMEDICAL PAPERS-OLOMOUC, 2011, 155 (01) :3-9

[36] Recurrent gene fusions in prostate cancer [J].

Kumar-Sinha, Chandan ;

Tomlins, Scott A. ;

Chinnaiyan, Arul M. .

NATURE REVIEWS CANCER, 2008, 8 (07) :497-511

[37] Landscape of gene fusions in epithelial cancers: seq and ye shall find [J].

Kumar-Sinha, Chandan ;

Kalyana-Sundaram, Shanker ;

Chinnaiyan, Arul M. .

GENOME MEDICINE, 2015, 7

[38] Fusion transcript loci share many genomic features with non-fusion loci [J].

Lai, John ;

An, Jiyuan ;

Seim, Inge ;

Walpole, Carina ;

Hoffman, Andrea ;

Moya, Leire ;

Srinivasan, Srilakshmi ;

Perry-Keene, Joanna L. ;

Wang, Chenwei ;

Lehman, Melanie L. ;

Nelson, Colleen C. ;

Clements, Judith A. ;

Batra, Jyotsna .

BMC GENOMICS, 2015, 16

[39] From sequence to molecular pathology, and a mechanism driving the neuroendocrine phenotype in prostate cancer [J].

Lapuk, Anna V. ;

Wu, Chunxiao ;

Wyatt, Alexander W. ;

McPherson, Andrew ;

McConeghy, Brian J. ;

Brahmbhatt, Sonal ;

Mo, Fan ;

Zoubeidi, Amina ;

Anderson, Shawn ;

Bell, Robert H. ;

Haegert, Anne ;

Shukin, Robert ;

Wang, Yuzhuo ;

Fazli, Ladan ;

Hurtado-Coll, Antonio ;

Jones, Edward C. ;

Hach, Faraz ;

Hormozdiari, Fereydoun ;

Hajirasouliha, Iman ;

Boutros, Paul C. ;

Bristow, Robert G. ;

Zhao, Yongjun ;

Marra, Marco A. ;

Fanjul, Andrea ;

Maher, Christopher A. ;

Chinnaiyan, Arul M. ;

Rubin, Mark A. ;

Beltran, Himisha ;

Sahinalp, S. Cenk ;

Gleave, Martin E. ;

Volik, Stanislav V. ;

Collins, Colin C. .

JOURNAL OF PATHOLOGY, 2012, 227 (03) :286-297

[40] Primary synovial sarcoma of the prostate: Report of 2 cases and literature review [J].

Li Jun ;

Sun Ke ;

Wang Zhaoming ;

Xu Linjie ;

Yu Xinru .

INTERNATIONAL JOURNAL OF SURGICAL PATHOLOGY, 2008, 16 (03) :329-334

← 1 2 3 4 5 6 7 8 9 →