Mungbean DIRIGENT Gene Subfamilies and Their Expression Profiles Under Salt and Drought Stresses

被引:16
|
作者
Xu, Wenying [1 ]
Liu, Tong [1 ]
Zhang, Huiying [1 ]
Zhu, Hong [2 ]
机构
[1] Qingdao Agr Univ, Coll Life Sci, Qingdao, Peoples R China
[2] Qingdao Agr Univ, Coll Agron, Qingdao, Peoples R China
关键词
mungbean; VrDIR; gene expression; salt stress; drought stress; DOMAIN-CONTAINING PROTEIN; CONIFER DEFENSE; ARABIDOPSIS; PHYLOGENY; DISCOVERY; SEQUENCE; FAMILY; LIGNAN; COTTON;
D O I
10.3389/fgene.2021.658148
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
DIRIGENT (DIR) genes are key players in environmental stress responses that have been identified in many vascular plant species. However, few studies have examined the VrDIR genes in mungbean. In this study, we characterized 37 VrDIR genes in mungbean using a genome-wide identification method. VrDIRs were distributed on seven of the 11 mungbean chromosomes, and chromosome three contained the most VrDIR genes, with seven members. Thirty-two of the 37 VrDIRs contained a typical DIR gene structure, with one exon; the conserved DIR domain (i.e., Pfam domain) occupied most of the protein in 33 of the 37 VrDIRs. The gene structures of VrDIR genes were analyzed, and a total of 19 distinct motifs were detected. VrDIR genes were classified into five groups based on their phylogenetic relationships, and 13 duplicated gene pairs were identified. In addition, a total of 92 cis-acting elements were detected in all 37 VrDIR promoter regions, and VrDIR genes contained different numbers and types of cis-acting elements. As a result, VrDIR genes showed distinct expression patterns in different tissues and in response to salt and drought stress.</p>
引用
收藏
页数:15
相关论文
共 50 条
  • [31] EFFECT OF DIFFERENT LEVELS OF SALT AND DROUGHT STRESSES ON GENE EXPRESSION OF TWO TOLERANCE-DIFFERENT TOMATO CULTIVARS IN VITRO
    Al-Amery, L. K. J.
    Annon, Ali
    IRAQI JOURNAL OF AGRICULTURAL SCIENCES, 2024, 55 (02): : 795 - 802
  • [32] Expression of Synthetic hsr1 Gene in Transgenic Tobacco (Nicotiana tabacum) for Enhanced Tolerance to Drought and Salt Stresses
    Huma, Tayyaba
    Shaheen, Tayyaba
    Asghar, Azeem
    Nurjis, Farwa
    Khan, Ahmad Sattar
    Mukhtar, Zahid
    INTERNATIONAL JOURNAL OF AGRICULTURE AND BIOLOGY, 2015, 17 (05) : 1031 - 1036
  • [33] Characterization and Expression of KT/HAK/KUP Transporter Family Genes in Willow under Potassium Deficiency, Drought, and Salt Stresses
    Liang, Meixia
    Gao, Yachao
    Mao, Tingting
    Zhang, Xiaoyan
    Zhang, Shaoying
    Zhang, Hongxia
    Song, Zhizhong
    BIOMED RESEARCH INTERNATIONAL, 2020, 2020
  • [34] Gene expression regulation in roots under drought
    Janiak, Agnieszka
    Kwasniewski, Miroslaw
    Szarejko, Iwona
    JOURNAL OF EXPERIMENTAL BOTANY, 2016, 67 (04) : 1003 - 1014
  • [35] Hsf transcription factor gene family in peanut (Arachis hypogaea L.): genome-wide characterization and expression analysis under drought and salt stresses
    Wang, Qi
    Zhang, Zhenbiao
    Guo, Cun
    Zhao, Xiaobo
    Li, Zhiyuan
    Mou, Yifei
    Sun, Quanxi
    Wang, Juan
    Yuan, Cuiling
    Li, Chunjuan
    Cong, Ping
    Shan, Shihua
    FRONTIERS IN PLANT SCIENCE, 2023, 14
  • [36] The Genome-Wide Identification, Characterization, and Expression Profiles of the NADPH Oxidase (NOX) Gene Family under Drought and Salt Stress in Opisthopappus taihangensis (Asteraceae)
    Ye, Hang
    Liu, Hengzhao
    Han, Mian
    Zhang, Naiyu
    Feng, Xiaolong
    Gao, Ting
    Lei, Dingfan
    Li, Haochen
    Gao, Zhimei
    Su, Yu
    Chai, Min
    Zhou, Huijuan
    Wang, Yiling
    AGRONOMY-BASEL, 2024, 14 (04):
  • [37] Gene expression profiles and intracellular contents of stress protectants in Saccharomyces cerevisiae under ethanol and sorbitol stresses
    Tomohiro Kaino
    Hiroshi Takagi
    Applied Microbiology and Biotechnology, 2008, 79 : 273 - 283
  • [38] Gene expression profiles and intracellular contents of stress protectants in Saccharomyces cerevisiae under ethanol and sorbitol stresses
    Kaino, Tomohiro
    Takagi, Hiroshi
    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2008, 79 (02) : 273 - 283
  • [39] Isolation and expression profiles of class III PRX gene family under drought stress in Camellia sinensis
    Li, H. J.
    Wang, H. B.
    Chen, Y.
    Ma, Q. P.
    Zhao, Z.
    Li, X. H.
    Chen, X.
    BIOLOGIA PLANTARUM, 2020, 64 : 280 - 288
  • [40] Comparative Profiles of Gene Expression in Leaves and Roots of Maize Seedlings under Conditions of Salt Stress and the Removal of Salt Stress
    Qing, Dong-Jin
    Lu, Hai-Feng
    Li, Ning
    Dong, Hai-Tao
    Dong, Deng-Feng
    Li, You-Zhi
    PLANT AND CELL PHYSIOLOGY, 2009, 50 (04) : 889 - 903