Concatenated mitochondrial DNA of the coccidian parasite Eimeria tenella

被引:41
作者
Hikosaka, Kenji [1 ]
Nakai, Yutaka [2 ]
Watanabe, Yoh-ichi [3 ]
Tachibana, Shin-Ichiro [1 ]
Arisue, Nobuko [4 ]
Palacpac, Nirianne Marie Q. [4 ]
Toyama, Tomoko [1 ,4 ]
Honma, Hajime [1 ,5 ]
Horii, Toshihiro [4 ]
Kita, Kiyoshi [3 ]
Tanabe, Kazuyuki [1 ]
机构
[1] Osaka Univ, Microbial Dis Res Inst, Int Res Ctr Infect Dis, Lab Malariol, Osaka 5650871, Japan
[2] Tohoku Univ, Grad Sch Agr Sci, Lab Sustainable Environm Biol, Osaki, Miyagi 9896711, Japan
[3] Univ Tokyo, Grad Sch Med, Dept Biomed Chem, Bunkyo Ku, Tokyo 1130033, Japan
[4] Osaka Univ, Microbial Dis Res Inst, Dept Mol Protozool, Osaka 5650871, Japan
[5] Japan Soc Promot Sci, Tokyo, Japan
关键词
Mitochondrion; Mitochondrial genome; Eimeria; Plasmodium; Apicomplexa; Nuclear mitochondrial DNA; MAXIMUM-LIKELIHOOD; SEQUENCE ALIGNMENT; GENOME; APICOMPLEXAN; PLASMODIUM; GENES; RNA; REPLICATION; PHYLOGENY; DIVERSITY;
D O I
10.1016/j.mito.2010.10.003
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Apicomplexan parasites of the genus Plasmodium, pathogens causing malaria, and the genera Babesia and Theileria, aetiological agents of piroplasmosis, are closely related. However, their mitochondrial (mt) genome structures are highly divergent: Plasmodium has a concatemer of 6-kb unit and Babesia/Theileria a monomer of 6.6- to 8.2-kb with terminal inverted repeats. Fragmentation of ribosomal RNA (rRNA) genes and gene arrangements are remarkably distinctive. To elucidate the evolutionary origin of this structural divergence, we determined the mt genome of Eimeria tenella, pathogens of coccidiosis in domestic fowls. Analysis revealed that E. tenella mt genome was concatemeric with similar protein-coding genes and rRNA gene fragments to Plasmodium. Copy number was 50-fold of the nuclear genome. Evolution of structural divergence in the apicomplexan mt genomes is discussed. (C) 2010 Elsevier B.V. and Mitochondria Research Society. All rights reserved.
引用
收藏
页码:273 / 278
页数:6
相关论文
共 39 条
[1]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[2]  
[Anonymous], 2002, PAUP*. Phylogenetic Analysis Using Parsimony (*and other methods). Version 4
[3]   Complete sequence of the mitochondrial genome of Tetrahymena thermophila and comparative methods for identifying highly divergent genes [J].
Brunk, CF ;
Lee, LC ;
Tran, AB ;
Li, JL .
NUCLEIC ACIDS RESEARCH, 2003, 31 (06) :1673-1682
[4]   Apicoplast genome of the coccidian Eimeria tenella [J].
Cai, XM ;
Fuller, AL ;
McDougald, LR ;
Zhu, G .
GENE, 2003, 321 :39-46
[5]   Mitochondrial DNA sequences are present inside nuclear DNA in rat tissues and increase with age [J].
Caro, Pilar ;
Gomez, Jose ;
Arduini, Alessandro ;
Gonzalez-Sanchez, Monica ;
Gonzalez-Garcia, Miriam ;
Borras, Consuelo ;
Vina, Jose ;
Puertas, Maria J. ;
Sastre, Juan ;
Barja, Gustavo .
MITOCHONDRION, 2010, 10 (05) :479-486
[6]   Eimeria tenella: two species of extrachromosomal DNA revealed by pulsed-field gel electrophoresis [J].
Dunn, PPJ ;
Stephens, PJ ;
Shirley, MW .
PARASITOLOGY RESEARCH, 1998, 84 (04) :272-275
[7]   THE 6-KB ELEMENT OF PLASMODIUM-FALCIPARUM ENCODES MITOCHONDRIAL CYTOCHROME GENES [J].
FEAGIN, JE .
MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 1992, 52 (01) :145-148
[8]   Identification of additional rRNA fragments encoded by the Plasmodium falciparum 6 kb element [J].
Feagin, JE ;
Mericle, BL ;
Werner, E ;
Morris, M .
NUCLEIC ACIDS RESEARCH, 1997, 25 (02) :438-446
[9]   A hidden Markov Model approach to variation among sites in rate of evolution [J].
Felsenstein, J ;
Churchill, GA .
MOLECULAR BIOLOGY AND EVOLUTION, 1996, 13 (01) :93-104
[10]   Exploring genomic dark matter: A critical assessment of the performance of homology search methods on noncoding RNA [J].
Freyhult, Eva K. ;
Bollback, Jonathan P. ;
Gardner, Paul P. .
GENOME RESEARCH, 2007, 17 (01) :117-125