共 51 条
QSRR models for predicting the retention indices of VOCs in different datasets using an efficient variable selection method coupled with artificial neural network modeling: ANN-based QSPR modeling
被引:2
作者:

Mozafari, Zeinab
论文数: 0 引用数: 0
h-index: 0
机构:
Shahrood Univ Technol, Dept Chem, POB 36155-316, Shahrood, Iran Shahrood Univ Technol, Dept Chem, POB 36155-316, Shahrood, Iran

Arab Chamjangali, Mansour
论文数: 0 引用数: 0
h-index: 0
机构:
Shahrood Univ Technol, Dept Chem, POB 36155-316, Shahrood, Iran Shahrood Univ Technol, Dept Chem, POB 36155-316, Shahrood, Iran

论文数: 引用数:
h-index:
机构:

论文数: 引用数:
h-index:
机构:
机构:
[1] Shahrood Univ Technol, Dept Chem, POB 36155-316, Shahrood, Iran
[2] Ferdowsi Univ Mashhad, Fac Math Sci, Dept Stat, Mashhad, Razavi Khorasan, Iran
关键词:
Variable selection;
SCAD;
QSRR;
Artificial neural network;
VOCs;
VOLATILE ORGANIC-COMPOUNDS;
IDENTIFICATION;
VALIDATION;
SHRINKAGE;
FOODS;
D O I:
10.1007/s13738-021-02488-2
中图分类号:
O6 [化学];
学科分类号:
0703 ;
摘要:
A combination of the smoothly clipped absolute deviation (SCAD) method and the artificial neural network (ANN) was utilized as a novel methodology (SCAD-ANN) in the quantitative structure-retention indices relationship (QSRR). The proposed SCAD method reduces the dimension of data before using the robust ANN modeling method. The efficiency of the SCAD-ANN methods was evaluated by the construction of a QSRR model between the most relevant molecular descriptors (MDs) and RIs for two sets of volatile organic compounds. The SCAD method was applied to training data, and effective MDs were selected in a lambda with the lowest cross-validation error (lambda(min)) and were defined as the inputs to the ANN modeling method. All ANN parameters were optimized simultaneously. Some statistical parameters were computed, and the obtained results indicate that the constructed QSRR models have acceptable values. Also, the applicability domain analysis reveals that more than 95% of the data are in the confidence range, indicating that the prediction results of the SCAD-ANN models are reliable.
引用
收藏
页码:2617 / 2630
页数:14
相关论文
共 51 条
- [1] QSRR Model for predicting retention indices of Satureja kitaibelii Wierzb. ex Heuff. essential oil composition[J]. INDUSTRIAL CROPS AND PRODUCTS, 2020, 154Acimovic, Milica论文数: 0 引用数: 0 h-index: 0机构: Inst Field & Vegetable Crops Novi Sad, Maksima Gorkog 30, Novi Sad 21000, Serbia Inst Field & Vegetable Crops Novi Sad, Maksima Gorkog 30, Novi Sad 21000, SerbiaPezo, Lato论文数: 0 引用数: 0 h-index: 0机构: Univ Belgrade, Inst Gen & Phys Chem, Studentski Trg 10-12, Belgrade 11000, Serbia Inst Field & Vegetable Crops Novi Sad, Maksima Gorkog 30, Novi Sad 21000, SerbiaTesevic, Vele论文数: 0 引用数: 0 h-index: 0机构: Univ Belgrade, Fac Chem, Studentski Trg 10-12, Belgrade 11000, Serbia Inst Field & Vegetable Crops Novi Sad, Maksima Gorkog 30, Novi Sad 21000, SerbiaCabarkapa, Ivana论文数: 0 引用数: 0 h-index: 0机构: Univ Novi Sad, Inst Food Technol, Bulevar Cara Lazara 1, Novi Sad 21000, Serbia Inst Field & Vegetable Crops Novi Sad, Maksima Gorkog 30, Novi Sad 21000, SerbiaTodosijevic, Marina论文数: 0 引用数: 0 h-index: 0机构: Univ Belgrade, Fac Chem, Studentski Trg 10-12, Belgrade 11000, Serbia Inst Field & Vegetable Crops Novi Sad, Maksima Gorkog 30, Novi Sad 21000, Serbia
- [2] QSRR Model for Predicting Retention Indices of Geraniol Chemotype ofThymus serpyllumEssential Oil[J]. JOURNAL OF ESSENTIAL OIL BEARING PLANTS, 2020, 23 (03) : 464 - 473Acimovic, Milica论文数: 0 引用数: 0 h-index: 0机构: Inst Field & Vegetable Crops Novi Sad, Novi Sad, Serbia Inst Field & Vegetable Crops Novi Sad, Novi Sad, SerbiaPezo, Lato论文数: 0 引用数: 0 h-index: 0机构: Univ Belgrade, Inst Gen & Phys Chem, Belgrade, Serbia Inst Field & Vegetable Crops Novi Sad, Novi Sad, SerbiaJeremic, Jovana Stankovic论文数: 0 引用数: 0 h-index: 0机构: Univ Belgrade, Inst Chem Technol & Met, Belgrade, Serbia Inst Field & Vegetable Crops Novi Sad, Novi Sad, SerbiaCvetkovic, Mirjana论文数: 0 引用数: 0 h-index: 0机构: Univ Belgrade, Inst Chem Technol & Met, Belgrade, Serbia Inst Field & Vegetable Crops Novi Sad, Novi Sad, SerbiaRat, Milica论文数: 0 引用数: 0 h-index: 0机构: Univ Novi Sad, Fac Sci, Novi Sad, Serbia Inst Field & Vegetable Crops Novi Sad, Novi Sad, SerbiaCabarkapa, Ivana论文数: 0 引用数: 0 h-index: 0机构: Univ Novi Sad, Inst Food Technol, Novi Sad, Serbia Inst Field & Vegetable Crops Novi Sad, Novi Sad, SerbiaTesevic, Vele论文数: 0 引用数: 0 h-index: 0机构: Univ Belgrade, Fac Chem, Belgrade, Serbia Inst Field & Vegetable Crops Novi Sad, Novi Sad, Serbia
- [3] Least absolute deviation estimator-bridge variable selection and estimation for quantitative structure-activity relationship model[J]. JOURNAL OF CHEMOMETRICS, 2019, 33 (07)Al-Dabbagh, Zainab Tawfeeq论文数: 0 引用数: 0 h-index: 0机构: Univ Mosul, Dept Operat Res & Artificial Intelligence, Mosul, Iraq Univ Mosul, Dept Operat Res & Artificial Intelligence, Mosul, IraqAlgamal, Zakariya Yahya论文数: 0 引用数: 0 h-index: 0机构: Univ Mosul, Dept Stat & Informat, Mosul, Iraq Univ Mosul, Dept Operat Res & Artificial Intelligence, Mosul, Iraq
- [4] A penalized quantitative structure-property relationship study on melting point of energetic carbocyclic nitroaromatic compounds using adaptive bridge penalty[J]. SAR AND QSAR IN ENVIRONMENTAL RESEARCH, 2018, 29 (05) : 339 - 353Al-Fakih, A. M.论文数: 0 引用数: 0 h-index: 0机构: Univ Teknol Malaysia, Dept Chem, Fac Sci, Johor Baharu, Malaysia Sanaa Univ, Dept Chem, Fac Sci, Sanaa, Yemen Univ Teknol Malaysia, Dept Chem, Fac Sci, Johor Baharu, MalaysiaAlgamal, Z. Y.论文数: 0 引用数: 0 h-index: 0机构: Univ Mosul, Dept Stat & Informat, Mosul, Iraq Univ Teknol Malaysia, Dept Chem, Fac Sci, Johor Baharu, MalaysiaLee, M. H.论文数: 0 引用数: 0 h-index: 0机构: Univ Teknol Malaysia, Dept Math Sci, Fac Sci, Johor Baharu, Malaysia Univ Teknol Malaysia, Dept Chem, Fac Sci, Johor Baharu, MalaysiaAziz, M.论文数: 0 引用数: 0 h-index: 0机构: Univ Teknol Malaysia, Dept Chem, Fac Sci, Johor Baharu, Malaysia Univ Teknol Malaysia, Adv Membrane Technol Ctr, Johor Baharu, Malaysia Univ Teknol Malaysia, Dept Chem, Fac Sci, Johor Baharu, Malaysia
- [5] A sparse QSRR model for predicting retention indices of essential oils based on robust screening approach[J]. SAR AND QSAR IN ENVIRONMENTAL RESEARCH, 2017, 28 (08) : 691 - 703Al-Fakih, A. M.论文数: 0 引用数: 0 h-index: 0机构: Univ Teknol Malaysia, Dept Chem, Johor Baharu, Malaysia Sanaa Univ, Fac Sci, Dept Chem, Sanaa, Yemen Univ Teknol Malaysia, Dept Chem, Johor Baharu, MalaysiaAlgamal, Z. Y.论文数: 0 引用数: 0 h-index: 0机构: Univ Mosul, Dept Stat & Informat, Mosul, Iraq Univ Teknol Malaysia, Dept Chem, Johor Baharu, MalaysiaLee, M. H.论文数: 0 引用数: 0 h-index: 0机构: Univ Teknol Malaysia, Fac Sci, Dept Math Sci, Johor Baharu, Malaysia Univ Teknol Malaysia, Dept Chem, Johor Baharu, MalaysiaAziz, M.论文数: 0 引用数: 0 h-index: 0机构: Univ Teknol Malaysia, Dept Chem, Johor Baharu, Malaysia Univ Teknol Malaysia, Adv Membrane Technol Ctr, Johor Baharu, Malaysia Univ Teknol Malaysia, Dept Chem, Johor Baharu, Malaysia
- [6] High-dimensional QSAR modelling using penalized linear regression model with L1/2-norm[J]. SAR AND QSAR IN ENVIRONMENTAL RESEARCH, 2016, 27 (09) : 703 - 719Algamal, Z. Y.论文数: 0 引用数: 0 h-index: 0机构: Univ Teknol Malaysia, Dept Math Sci, Johor Baharu, Malaysia Univ Teknol Malaysia, Dept Math Sci, Johor Baharu, MalaysiaLee, M. H.论文数: 0 引用数: 0 h-index: 0机构: Univ Teknol Malaysia, Dept Math Sci, Johor Baharu, Malaysia Univ Teknol Malaysia, Dept Math Sci, Johor Baharu, MalaysiaAl-Fakih, A. M.论文数: 0 引用数: 0 h-index: 0机构: Univ Teknol Malaysia, Dept Chem, Johor Baharu, Malaysia Univ Teknol Malaysia, Dept Math Sci, Johor Baharu, MalaysiaAziz, M.论文数: 0 引用数: 0 h-index: 0机构: Univ Teknol Malaysia, Dept Chem, Johor Baharu, Malaysia Univ Teknol Malaysia, Dept Math Sci, Johor Baharu, Malaysia
- [7] Improvement of quantitative structure-retention relationship models for chromatographic retention prediction of peptides applying individual local partial least squares models[J]. TALANTA, 2020, 219Andries, Jan P. M.论文数: 0 引用数: 0 h-index: 0机构: Univ Profess Educ, Avans Hogesch, Res Grp Anal Tech Life Sci, POB 90116, NL-4800 RA Breda, Netherlands Univ Profess Educ, Avans Hogesch, Res Grp Anal Tech Life Sci, POB 90116, NL-4800 RA Breda, NetherlandsGoodarzi, Mohammad论文数: 0 引用数: 0 h-index: 0机构: Univ Texas Southwestern Med Ctr Dallas, Dept Biochem, Dallas, TX 75390 USA Univ Profess Educ, Avans Hogesch, Res Grp Anal Tech Life Sci, POB 90116, NL-4800 RA Breda, NetherlandsVander Heyden, Yvan论文数: 0 引用数: 0 h-index: 0机构: Vrije Univ Brussel VUB, Dept Analyt Chem Appl Chemometr & Mol Modelling F, Laarbeeklaan 103, B-1090 Brussels, Belgium Univ Profess Educ, Avans Hogesch, Res Grp Anal Tech Life Sci, POB 90116, NL-4800 RA Breda, Netherlands
- [8] Phosphorhydrazides as urease and acetylcholinesterase inhibitors: biological evaluation and QSAR study[J]. JOURNAL OF THE IRANIAN CHEMICAL SOCIETY, 2016, 13 (07) : 1213 - 1223Asadi, Lida论文数: 0 引用数: 0 h-index: 0机构: Islamic Azad Univ, Dept Chem, Sci & Res Branch, Tehran, Iran Tarbiat Modares Univ, Dept Chem, POB 14115-175, Tehran, IranGholivand, Khodayar论文数: 0 引用数: 0 h-index: 0机构: Tarbiat Modares Univ, Dept Chem, POB 14115-175, Tehran, Iran Tarbiat Modares Univ, Dept Chem, POB 14115-175, Tehran, Iran论文数: 引用数: h-index:机构:
- [9] In silico prediction of cutaneous penetration rate of some chemicals from their molecular structural descriptors[J]. JOURNAL OF THE IRANIAN CHEMICAL SOCIETY, 2019, 16 (10) : 2159 - 2168Behgozin, Seyedeh Mozhgan论文数: 0 引用数: 0 h-index: 0机构: Univ Mazandaran, Chemomet Lab, Fac Chem, Babol Sar, Iran Univ Mazandaran, Chemomet Lab, Fac Chem, Babol Sar, IranFatemi, Mohammad Hossein论文数: 0 引用数: 0 h-index: 0机构: Univ Mazandaran, Chemomet Lab, Fac Chem, Babol Sar, Iran Univ Mazandaran, Chemomet Lab, Fac Chem, Babol Sar, Iran
- [10] Least absolute shrinkage and selection operator and dimensionality reduction techniques in quantitative structure retention relationship modeling of retention in hydrophilic interaction liquid chromatography[J]. JOURNAL OF CHROMATOGRAPHY A, 2015, 1403 : 54 - 62Daghir-Wojtkowiak, Emilia论文数: 0 引用数: 0 h-index: 0机构: Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, Poland Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, PolandWiczling, Pawel论文数: 0 引用数: 0 h-index: 0机构: Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, Poland Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, PolandBocian, Szymon论文数: 0 引用数: 0 h-index: 0机构: Nicholas Copernicus Univ, Fac Chem, Dept Environm Chem & Bioanalyt, PL-87100 Torun, Poland Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, PolandKubik, Lukasz论文数: 0 引用数: 0 h-index: 0机构: Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, Poland Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, PolandKoslinski, Piotr论文数: 0 引用数: 0 h-index: 0机构: Nicolaus Copernicus Univ Torun, Ludwik Rydygier Coll Med Bydgoszcz, Dept Toxicol, PL-85094 Bydgoszcz, Poland Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, PolandBuszewski, Boguslaw论文数: 0 引用数: 0 h-index: 0机构: Nicholas Copernicus Univ, Fac Chem, Dept Environm Chem & Bioanalyt, PL-87100 Torun, Poland Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, PolandKaliszan, Roman论文数: 0 引用数: 0 h-index: 0机构: Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, Poland Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, PolandMarkuszewski, Michal Jan论文数: 0 引用数: 0 h-index: 0机构: Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, Poland Med Univ Gdansk, Dept Biopharmaceut & Pharmacodynam, PL-80416 Gdansk, Poland