Metashooting: a novel tool for free energy reconstruction from polymorphic phase transition mechanisms

被引:3
作者
Jobbins, Samuel Alexander [1 ]
Boulfelfel, Salah Eddine [2 ]
Leoni, Stefano [1 ]
机构
[1] Cardiff Univ, Sch Chem, Cardiff CF10 3AT, S Glam, Wales
[2] Georgia Inst Technol, Sch Chem & Biomol Engn, Atlanta, GA 30332 USA
基金
英国工程与自然科学研究理事会;
关键词
DYNAMICS; PRESSURE; LANDSCAPE; SYSTEM; SIMULATIONS; PATHWAYS; NACL; ZNO;
D O I
10.1039/c8fd00053k
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We introduce a novel scheme for the mechanistic investigation of solid-solid phase transitions, which we dub metashooting'. Combining transition path sampling, molecular dynamics and metadynamics, this scheme allows for both a complete mechanistic analysis and detailed mapping of the free energy surface. This is illustrated by performing metashooting calculations on the pressure-induced B4/B3 B1 phase transition in ZnO. The resulting free energy map helps to clarify the role of intermediate configurations along this activated process and the competition between different mechanistic regimes with superior accuracy. We argue that metashooting can be efficiently applied to a broader class of activated processes.
引用
收藏
页码:235 / 251
页数:17
相关论文
共 37 条
  • [31] EMERGENT HIERARCHICAL STRUCTURES IN COMPLEX-SYSTEM DYNAMICS
    SIBANI, P
    SCHON, JC
    SALAMON, P
    ANDERSSON, JO
    [J]. EUROPHYSICS LETTERS, 1993, 22 (07): : 479 - 485
  • [32] NON-PHYSICAL SAMPLING DISTRIBUTIONS IN MONTE-CARLO FREE-ENERGY ESTIMATION - UMBRELLA SAMPLING
    TORRIE, GM
    VALLEAU, JP
    [J]. JOURNAL OF COMPUTATIONAL PHYSICS, 1977, 23 (02) : 187 - 199
  • [33] PLUMED 2: New feathers for an old bird
    Tribello, Gareth A.
    Bonomi, Massimiliano
    Branduardi, Davide
    Camilloni, Carlo
    Bussi, Giovanni
    [J]. COMPUTER PHYSICS COMMUNICATIONS, 2014, 185 (02) : 604 - 613
  • [34] Well-Tempered Variational Approach to Enhanced Sampling
    Valsson, Omar
    Parrinello, Michele
    [J]. JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2015, 11 (05) : 1996 - 2002
  • [35] Variational Approach to Enhanced Sampling and Free Energy Calculations
    Valsson, Omar
    Parrinello, Michele
    [J]. PHYSICAL REVIEW LETTERS, 2014, 113 (09)
  • [36] Energy Landscape Investigations Using the Prescribed Path Method in the ZnO System
    Zagorac, Dejan
    Schoen, J. Christian
    Jansen, Martin
    [J]. JOURNAL OF PHYSICAL CHEMISTRY C, 2012, 116 (31) : 16726 - 16739
  • [37] Nucleation and growth in pressure-induced phase transitions from molecular dynamics simulations: Mechanism of the reconstructive transformation of NaCl to the CsCl-Type structure
    Zahn, D
    Leoni, S
    [J]. PHYSICAL REVIEW LETTERS, 2004, 92 (25) : 250201 - 1