Semi-empirical topological index: a tool for QSPR/QSAR studies

被引:25
作者
Junkes, BD
Arruda, ACS
Yunes, RA
Porto, LC
Heinzen, VEF
机构
[1] Univ Fed Santa Catarina, Dept Quim, BR-88040900 Florianopolis, SC, Brazil
[2] Univ Caxias do Sul, Dept Quim, BR-95070560 Caxias Do Sul, RS, Brazil
关键词
topological index; QSPR; QSAR; semi-empirical topological index; aliphatic alcohols;
D O I
10.1007/s00894-004-0231-8
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The semi-empirical topological index (I-ET), developed to predict the chromatographic retention of a series of organic compounds, is extended to predict other properties and biological activities of aliphatic alcohols. This topological index takes into account the contribution of each individual atom type to the property considered and is able to encode information about structural features of the molecules. The efficiency of this index is verified by high quality Structure - Property and structure - Activity Relationships (QSPR/QSAR) models obtained for several representative physicochemical properties, biological activities and toxicities of aliphatic alcohols. Most of the properties investigated are well modeled ( r > 0.98) employing the I-ET. Cross-validation using the more general leave-one-out method demonstrates that these models are highly statistically reliable. The proposed I-ET index promises to be a useful descriptor in the QSPR/QSAR studies.
引用
收藏
页码:128 / 134
页数:7
相关论文
共 39 条
[1]   Quantitative structure-property relationship study of chromatographic retention indices and normal boiling points for oxo compounds using the semi-empirical topological method [J].
Amboni, RDC ;
Junkes, BD ;
Yunes, RA ;
Heinzen, VEF .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2002, 586 :71-80
[2]  
Amboni RDDC, 2002, J MOL STRUC-THEOCHEM, V579, P53, DOI 10.1016/S0166-1280(01)00737-0
[3]   Quantitative structure-odor relationships of aliphatic esters using topological indices [J].
Amboni, RDDC ;
Junkes, BD ;
Yunes, RA ;
Heinzen, VEF .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2000, 48 (08) :3517-3521
[4]   QUANTITATIVE STRUCTURE RETENTION RELATIONSHIP STUDIES OF ODOR-ACTIVE ALIPHATIC-COMPOUNDS WITH OXYGEN-CONTAINING FUNCTIONAL-GROUPS [J].
ANKER, LS ;
JURS, PC ;
EDWARDS, PA .
ANALYTICAL CHEMISTRY, 1990, 62 (24) :2676-2684
[5]  
[Anonymous], INTERNET ELECT J MOL
[6]   RELATIONSHIP BETWEEN KOVATS RETENTION INDEXES AND MOLECULAR CONNECTIVITY INDEXES OF TETRALONES, COUMARINS AND STRUCTURALLY RELATED-COMPOUNDS [J].
ARRUDA, AC ;
HEINZEN, VEF ;
YUNES, RA .
JOURNAL OF CHROMATOGRAPHY, 1993, 630 (1-2) :251-256
[7]  
Cao CZ, 1998, J CHEM INF COMP SCI, V38, P1, DOI 10.1021/ci9601729
[8]   Recent advances on the role of topological indices in drug discovery research [J].
Estrada, E ;
Uriarte, E .
CURRENT MEDICINAL CHEMISTRY, 2001, 8 (13) :1573-1588
[9]   Generalization of topological indices [J].
Estrada, E .
CHEMICAL PHYSICS LETTERS, 2001, 336 (3-4) :248-252
[10]   CHARGE INDEXES - NEW TOPOLOGICAL DESCRIPTORS [J].
GALVEZ, J ;
GARCIA, R ;
SALABERT, MT ;
SOLER, R .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1994, 34 (03) :520-525