A continuum membrane model can predict curvature sensing by helix insertion

被引:7
|
作者
Fu, Yiben [1 ]
Zeno, Wade F. [2 ]
Stachowiak, Jeanne C. [3 ]
Johnson, Margaret E. [1 ]
机构
[1] Johns Hopkins Univ, TC Jenkins Dept Biophys, 3400 N Charles St, Baltimore, MD 21218 USA
[2] Univ Southern Calif, Mork Family Dept Chem Engn & Mat Sci, Los Angeles, CA 90089 USA
[3] Univ Texas Austin, Dept Biomed Engn, Austin, TX 78712 USA
基金
美国国家科学基金会;
关键词
AMPHIPATHIC HELICES; CHAIN-LENGTH; PROTEIN; GENERATION; MECHANISM; REVEALS;
D O I
10.1039/d1sm01333e
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Protein domains, such as ENTH (epsin N-terminal homology) and BAR (bin/amphiphysin/rvs), contain amphipathic helices that drive preferential binding to curved membranes. However, predicting how the physical parameters of these domains control this 'curvature sensing' behavior is challenging due to the local membrane deformations generated by the nanoscopic helix on the surface of a large sphere. We here use a deformable continuum model that accounts for the physical properties of the membrane and the helix insertion to predict curvature sensing behavior, with direct validation against multiple experimental datasets. We show that the insertion can be modeled as a local change to the membrane's spontaneous curvature, cins(0), producing excellent agreement with the energetics extracted from experiments on ENTH binding to vesicles and cylinders, and of ArfGAP helices to vesicles. For small vesicles with high curvature, the insertion lowers the membrane energy by relieving strain on a membrane that is far from its preferred curvature of zero. For larger vesicles, however, the insertion has the inverse effect, de-stabilizing the membrane by introducing more strain. We formulate here an empirical expression that accurately captures numerically calculated membrane energies as a function of both basic membrane properties (bending modulus kappa and radius R) as well as stresses applied by the inserted helix (cins(0) and area A(ins)). We therefore predict how these physical parameters will alter the energetics of helix binding to curved vesicles, which is an essential step in understanding their localization dynamics during membrane remodeling processes.
引用
收藏
页码:10649 / 10663
页数:15
相关论文
共 50 条
  • [1] A continuum membrane model can predict curvature sensing by helix insertion
    Fu, Yiben
    Zeno, Wade F.
    Stachowiak, Jeanne C.
    Johnson, Margaret E.
    Soft Matter, 2021, 17 (47): : 10649 - 10663
  • [2] A continuum membrane model can predict curvature sensing by helix insertion (vol 17, pg 10649, 2021)
    Fu, Yiben
    Zeno, Wade F.
    Stachowiak, Jeanne C.
    Johnson, Margaret E.
    SOFT MATTER, 2022, 18 (03) : 683 - 683
  • [3] Membrane Insertion Depth and Curvature Sensing
    Tyndall, Erin R.
    Gill, Richard L., Jr.
    Ramamurthi, Kumaran S.
    Tian, Fang
    BIOPHYSICAL JOURNAL, 2015, 108 (02) : 253A - 253A
  • [4] Mechanism of Membrane Curvature Sensing by Amphipathic Helix Containing Proteins
    Cui, Haosheng
    Lyman, Edward
    Voth, Gregory A.
    BIOPHYSICAL JOURNAL, 2011, 100 (05) : 1271 - 1279
  • [5] Membrane insertion and dissociation processes of a model transmembrane helix
    Yano, Y
    Matsuzaki, K
    BIOCHEMISTRY, 2002, 41 (41) : 12407 - 12413
  • [6] Membrane curvature sensing by model biomolecular condensates
    Anila, Midhun Mohan
    Ghosh, Rikhia
    Rozycki, Bartosz
    SOFT MATTER, 2023, 19 (20) : 3723 - 3732
  • [7] An orientational preference of a transmembrane helix in a multispanning membrane protein can influence the membrane insertion efficiency of a marginally hydrophobic neighbour helix
    Ojemalm, K.
    Halling, K. K.
    Nilsson, I.
    von Heijne, G.
    FEBS JOURNAL, 2010, 277 : 258 - 258
  • [8] Sensing membrane curvature
    Holthuis, JCM
    Burger, KNJ
    DEVELOPMENTAL CELL, 2003, 5 (06) : 821 - 822
  • [9] Membrane Insertion of a Voltage Sensor Helix
    Wee, Chze Ling
    Chetwynd, Alan
    Sansom, Mark S. P.
    BIOPHYSICAL JOURNAL, 2011, 100 (02) : 410 - 419
  • [10] Predicting membrane curvature sensing and remodeling by protein domains and assemblies using continuum models
    Fu, Yiben
    Zeno, Wade F.
    Stachowiak, Jeanne
    Johnson, Margaret
    BIOPHYSICAL JOURNAL, 2022, 121 (03) : 368A - 368A