Faecalibacter macacae gen. nov., sp. nov., isolated from the faeces of Macaca assamensis

被引:4
作者
Chen, Xiu [1 ,2 ]
Li, Gui-Ding [1 ]
Wei, Yun-Fang [2 ]
Li, You-Long [3 ]
Yu, Hua [2 ]
Zhang, Kun [1 ]
Jiang, Cheng-Lin [1 ]
Jiang, Yi [1 ]
机构
[1] Yunnan Univ, Sch Life Sci, Yunnan Inst Microbiol, Kunming 650091, Yunnan, Peoples R China
[2] Kunming Univ, Sch Med, Kunming 650214, Yunnan, Peoples R China
[3] Yunnan Wild Anim Pk, Kunming 650224, Yunnan, Peoples R China
基金
中国国家自然科学基金;
关键词
Faecalibacter macacaegen. nov. sp. nov; primate; faeces; Macaca assamensis; STERCORIS SP NOV; EMENDED DESCRIPTION; FAMILY FLAVOBACTERIACEAE; WAUTERSIELLA-FALSENII; SECONDARY STRUCTURE; GENOME SEQUENCE; INPUT SAMPLE; EMPEDOBACTER; EVOLUTION; MEMBER;
D O I
10.1099/ijsem.0.003815
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Huge numbers of bacteria reside in the digestive tract of most animals. During an investigation into the bacterial diversity of primates, strain YIM 102668(T) was isolated. When neighbour-joining phylogenetic analysis based on 16S rRNA gene sequences was conducted, strain YIM 102668(T) formed a cluster within the family Flavobacteriaceae and in a lineage not associated with any known group of previously proposed genera. Closely related genera were Algoriella (94.8%), Chishuiefla (94.8%), Empedobacter (highest 94.6%), Moheibacter (90.9%) and Weeksella (90.6%). In addition, strain YIM 102668(T) contained MK-6 as the predominant respiratory quinone and iso-C(15:0 )as the major fatty acid. The major polar lipid was phosphatidylethanolamine and the genomic DNA G+C content was 30.6 mol%. These chemotaxonomic characterizations confirmed that strain YIM 102668(T) belonged to the family Flavobacteriaceae. Supported by the results of phylogenetic, phenotypic and chemotaxonomic analyses, we propose that strain YIM 102668(T) represents a novel genus, for which the name Faecalibacter macacae gen. nov., sp. nov. is proposed. The type strain is YIM 102668(T) (=KCTC 52109(T) =CCTCC AB 2016016(T)).
引用
收藏
页码:751 / 758
页数:8
相关论文
共 50 条
[1]   Dynamic programming algorithms for RNA secondary structure prediction with pseudoknots [J].
Akutsu, T .
DISCRETE APPLIED MATHEMATICS, 2000, 104 (1-3) :45-62
[2]  
Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI 10.1099/00207713-52-3-1049
[3]  
Bernardet JF, 2012, BERGEYS MANUAL SYSTE, V4A
[4]   A new method to predict the consensus secondary structure of a set of unaligned RNA sequences [J].
Bouthinon, D ;
Soldano, H .
BIOINFORMATICS, 1999, 15 (10) :785-798
[5]  
Bowman J., 2006, PROKARYOTES, P677, DOI [DOI 10.1007/0-387-30747-8_26, 10.1007/0-387-30747-8_26]
[6]   Novel members of the family Flavobacteriaceae from Antarctic maritime habitats including Subsaximicrobium wynnwilliamsii gen. nov., sp nov., Subsaximicrobium saxinquililnus sp nov., Subsaxibacter broadyi gen. nov., sp nov., Lacinutrix copepodicola gen. nov., sp nov., and novel species of the genera Bizionia, Gelidibacter and Gillisia [J].
Bowman, JP ;
Nichols, DS .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 :1471-1486
[7]  
Chen X, 2017, CURRENT MICROBIOLOGY, V75, P1
[8]   Corynebacterium faecale sp nov., isolated from the faeces of Assamese macaque [J].
Chen, Xiu ;
Li, Gui-Ding ;
Li, Qin-Yuan ;
Hu, Cai-Juan ;
Liu, Cheng-Bin ;
Jiang, Yi ;
Jiang, Cheng-Lin ;
Han, Li ;
Huang, Xue-Shi .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 :2478-2483
[9]   Streptimonospora salina gen. nov., sp nov., a new member of the family Nocardiopsaceae [J].
Cui, XL ;
Mao, PH ;
Zeng, M ;
Li, WJ ;
Zhang, LP ;
Xu, LH ;
Jiang, CL .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :357-363
[10]   EVOLUTIONARY TREES FROM DNA-SEQUENCES - A MAXIMUM-LIKELIHOOD APPROACH [J].
FELSENSTEIN, J .
JOURNAL OF MOLECULAR EVOLUTION, 1981, 17 (06) :368-376