Why Single-Cell Sequencing Has Promise in MDS

被引:3
|
作者
Zhang, Xuan [1 ,2 ]
Grimes, H. Leighton [1 ,2 ,3 ,4 ]
机构
[1] Cincinnati Childrens Hosp Med Ctr, Div Immunobiol, Cincinnati, OH 45229 USA
[2] Cincinnati Childrens Hosp Med Ctr, Ctr Syst Immunol, Cincinnati, OH 45229 USA
[3] Cincinnati Childrens Hosp Med Ctr, Div Expt Hematol & Canc Biol, Cincinnati, OH 45229 USA
[4] Univ Cincinnati, Dept Pediat, Cincinnati, OH 45221 USA
来源
FRONTIERS IN ONCOLOGY | 2021年 / 11卷
关键词
myelodysplastic syndrome (MDS); single-cell sequencing (SCS); single cell multi-omics profiling; hematopoiesis; myeloid malignancies; HEMATOPOIETIC STEM-CELL; MYELODYSPLASTIC SYNDROMES; CLONAL HEMATOPOIESIS; TP53; MUTATIONS; PROGENITOR; CHROMATIN; RISK; REVEALS; RNA; LUSPATERCEPT;
D O I
10.3389/fonc.2021.769753
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Myelodysplastic syndromes (MDS) are a heterogeneous group of diseases characterized by ineffective hematopoiesis. The risk of MDS is associated with aging and the accumulation of somatic mutations in hematopoietic stem cells and progenitors (HSPC). While advances in DNA sequencing in the past decade unveiled clonal selection driven by mutations in MDS, it is unclear at which stage the HSPCs are trapped or what prevents mature cells output. Single-cell-sequencing techniques in recent years have revolutionized our understanding of normal hematopoiesis by identifying the transitional cell states between classical hematopoietic hierarchy stages, and most importantly the biological activities behind cell differentiation and lineage commitment. Emerging studies have adapted these powerful tools to investigate normal hematopoiesis as well as the clonal heterogeneity in myeloid malignancies and provide a progressive description of disease pathogenesis. This review summarizes the potential of growing single-cell-sequencing techniques, the evolving efforts to elucidate hematopoiesis in physiological conditions and MDS at single-cell resolution, and discuss how they may fill the gaps in our current understanding of MDS biology.
引用
收藏
页数:10
相关论文
共 50 条
  • [31] A Single-Cell Sequencing Guide for Immunologists
    See, Peter
    Lum, Josephine
    Chen, Jinmiao
    Ginhoux, Florent
    FRONTIERS IN IMMUNOLOGY, 2018, 9
  • [32] Applications of Single-Cell DNA Sequencing
    Evrony, Gilad D.
    Hinch, Anjali Gupta
    Luo, Chongyuan
    ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 22, 2021, 2021, 22 : 171 - 197
  • [33] Single-cell sequencing in cancer research
    Prado, Mireia Mato
    Frampton, Adam E.
    Stebbing, Justin
    Krell, Jonathan
    EXPERT REVIEW OF MOLECULAR DIAGNOSTICS, 2016, 16 (01) : 1 - 5
  • [34] Single-cell sequencing made simple
    Jeffrey M. Perkel
    Nature, 2017, 547 : 125 - 126
  • [35] Single-cell RNA Sequencing in Immunology
    Cao, Yirui
    Qiu, Yue
    Tu, Guowei
    Yang, Cheng
    CURRENT GENOMICS, 2020, 21 (08) : 564 - 575
  • [36] SINGLE-CELL SEQUENCING MADE SIMPLE
    Perkel, Jeffrey M.
    NATURE, 2017, 547 (7661) : 125 - 126
  • [37] Single-cell sequencing of diverse microorganisms
    Ertl, Henry
    NATURE REVIEWS GENETICS, 2024, 25 (04) : 234 - 234
  • [38] Single-Cell Sequencing in Neurodegenerative Disorders
    Pozojevic, Jelena
    Spielmann, Malte
    MOLECULAR DIAGNOSIS & THERAPY, 2023, 27 (05) : 553 - 561
  • [39] Single-cell sequencing in cancer genomics
    Love, J. Christopher
    CANCER RESEARCH, 2015, 75 (22)
  • [40] Single-Cell Sequencing in Neurodegenerative Disorders
    Jelena Pozojevic
    Malte Spielmann
    Molecular Diagnosis & Therapy, 2023, 27 : 553 - 561