The -omics era: Proteomics and lipidomics in vascular research

被引:30
作者
Didangelos, Athanasios [1 ]
Stegemann, Christin [1 ]
Mayr, Manuel [1 ]
机构
[1] Kings Coll London, Kings British Heart Fdn Ctr, London SE5 9NU, England
关键词
Proteomics; Atherosclerosis; Lipoproteins; Metabolomics; Biomarkers; Matrix; CORONARY-ARTERY-DISEASE; TO-RETENTION HYPOTHESIS; METABOLOMIC ANALYSIS; PROTEIN-KINASE; ATHEROSCLEROSIS; IDENTIFICATION; LIPOPROTEINS; BINDING; MARKER; PROTEOGLYCANS;
D O I
10.1016/j.atherosclerosis.2011.09.043
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
A main limitation of the current approaches to atherosclerosis research is the focus on the investigation of individual factors, which are presumed to be involved in the pathophysiology and whose biological functions are, at least in part, understood. These molecules are investigated extensively while others are not studied at all. In comparison to our detailed knowledge about the role of inflammation in atherosclerosis, little is known about extracellular matrix remodelling and the retention of individual lipid species rather than lipid classes in early and advanced atherosclerotic lesions. The recent development of mass spectrometry-based methods and advanced analytical tools are transforming our ability to profile extracellular proteins and lipid species in animal models and clinical specimen with the goal of illuminating pathological processes and discovering new biomarkers. (C) 2011 Elsevier Ireland Ltd. All rights reserved.
引用
收藏
页码:12 / 17
页数:6
相关论文
共 57 条
[1]   Circulating human monocytes in the acute coronary syndrome express a characteristic proteomic profile [J].
Barderas, Maria G. ;
Tunon, Jose ;
Darde, Veronica M. ;
De la Cuesta, Fernando ;
Duran, Maria C. ;
Jimenez-Nacher, Jose J. ;
Tarin, Nieves ;
Lopez-Bescos, Lorenzo ;
Egido, Jesus ;
Vivanco, Fernando .
JOURNAL OF PROTEOME RESEARCH, 2007, 6 (02) :876-886
[2]   Serum matrix metalloproteinase-3 and tissue inhibitor of metalloproteinases-1 as potential markers of carotid atherosclerosis in infraclinical hyperlipidemia [J].
Beaueux, JL ;
Giral, P ;
Bruckert, E ;
Bernard, M ;
Foglietti, MJ ;
Chapman, MJ .
ATHEROSCLEROSIS, 2003, 169 (01) :139-146
[3]   Plasma concentrations and genetic variation of matrix metalloproteinase 9 and prognosis of patients with cardiovascular disease [J].
Blankenberg, S ;
Rupprecht, HJ ;
Poirier, O ;
Bickel, C ;
Smieja, M ;
Hafner, G ;
Meyer, J ;
Cambien, F ;
Tiret, L .
CIRCULATION, 2003, 107 (12) :1579-1585
[4]  
BLIGH EG, 1959, CAN J BIOCHEM PHYS, V37, P911
[5]   SERUM TYPE-III PROCOLLAGEN PEPTIDE LEVELS IN CORONARY-ARTERY DISEASE (A MARKER OF ATHEROSCLEROSIS) [J].
BONNET, J ;
GARDERES, PE ;
AUMAILLEY, M ;
MOREAU, C ;
GOUVERNEUR, G ;
BENCHIMOL, D ;
CROCKETT, R ;
LARRUE, J ;
BRICAUD, H .
EUROPEAN JOURNAL OF CLINICAL INVESTIGATION, 1988, 18 (01) :18-21
[6]   Unexpected protective role for Toll-like receptor 3 in the arterial wall [J].
Cole, Jennifer E. ;
Navin, Tina J. ;
Cross, Amanda J. ;
Goddard, Michael E. ;
Alexopoulou, Lena ;
Mitra, Anuja T. ;
Davies, Alun H. ;
Flavell, Richard A. ;
Feldmann, Marc ;
Monaco, Claudia .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (06) :2372-2377
[7]   Electrospray ionization mass spectrometry identifies substrates and products of lipoprotein-associated phospholipase A2 in oxidized human low density lipoprotein [J].
Davis, Bill ;
Koster, Grielof ;
Douet, Lisa J. ;
Scigelova, Michaela ;
Woffendin, Gary ;
Ward, Joanna M. ;
Smith, Alberto ;
Humphries, Julia ;
Burnand, Kevin G. ;
Macphee, Colin H. ;
Postle, Anthony D. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2008, 283 (10) :6428-6437
[8]   Local Atherosclerotic Plaques Are a Source of Prognostic Biomarkers for Adverse Cardiovascular Events [J].
de Kleijn, Dominique P. V. ;
Moll, Frans L. ;
Hellings, Willem E. ;
Ozsarlak-Sozer, Gonen ;
de Bruin, Peter ;
Doevendans, Pieter A. ;
Vink, Aryan ;
Catanzariti, Louise M. ;
Schoneveld, Arjan H. ;
Algra, Ale ;
Daemen, Mat J. ;
Biessen, E. A. ;
de Jager, W. ;
Zhang, Huoming ;
de Vries, Jean-Paul ;
Falk, Erling ;
Lim, Sai K. ;
van der Spek, Peter J. ;
Sze, Siu Kwan ;
Pasterkamp, Gerard .
ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 2010, 30 (03) :612-U486
[9]   Extracellular Matrix Composition and Remodeling in Human Abdominal Aortic Aneurysms: A Proteomics Approach [J].
Didangelos, Athanasios ;
Yin, Xiaoke ;
Mandal, Kaushik ;
Saje, Angelika ;
Smith, Alberto ;
Xu, Qingbo ;
Jahangiri, Marjan ;
Mayr, Manuel .
MOLECULAR & CELLULAR PROTEOMICS, 2011, 10 (08)
[10]   Proteomics Characterization of Extracellular Space Components in the Human Aorta [J].
Didangelos, Athanasios ;
Yin, Xiaoke ;
Mandal, Kaushik ;
Baumert, Mark ;
Jahangiri, Marjan ;
Mayr, Manuel .
MOLECULAR & CELLULAR PROTEOMICS, 2010, 9 (09) :2048-2062