High-throughput synthetic rescue for exhaustive characterization of suppressor mutations in human genes

被引:3
|
作者
Kobaisi, Farah [1 ,2 ,3 ]
Fayyad, Nour [3 ]
Sulpice, Eric [1 ]
Badran, Bassam [2 ]
Fayyad-Kazan, Hussein [2 ]
Rachidi, Walid [3 ]
Gidrol, Xavier [1 ]
机构
[1] Univ Grenoble Alpes, INSERM, CEA, IRIG BGE U1038, F-38000 Grenoble, France
[2] Lebanese Univ, Fac Sci 1, Lab Canc Biol & Mol Immunol, Hadath, Lebanon
[3] Univ Grenoble Alpes, SYMMES CIBEST UMR 5819 UGA CNRS CEA, IRIG CEA Grenoble, Grenoble, France
关键词
Suppressor mutation; Genetic screening; Cell phenotype; Synthetic rescue; PROTEIN-PROTEIN INTERACTIONS; ALLELE-SPECIFIC SUPPRESSION; CAENORHABDITIS-ELEGANS; INFORMATIONAL SUPPRESSION; NONSENSE MUTATIONS; RNA INTERFERENCE; CANCER; SCREEN; CELLS; YEAST;
D O I
10.1007/s00018-020-03519-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Inherited or acquired mutations can lead to pathological outcomes. However, in a process defined as synthetic rescue, phenotypic outcome created by primary mutation is alleviated by suppressor mutations. An exhaustive characterization of these mutations in humans is extremely valuable to better comprehend why patients carrying the same detrimental mutation exhibit different pathological outcomes or different responses to treatment. Here, we first review all known suppressor mutations' mechanisms characterized by genetic screens on model species like yeast or flies. However, human suppressor mutations are scarce, despite some being discovered based on orthologue genes. Because of recent advances in high-throughput screening, developing an inventory of human suppressor mutations for pathological processes seems achievable. In addition, we review several screening methods for suppressor mutations in cultured human cells through knock-out, knock-down or random mutagenesis screens on large scale. We provide examples of studies published over the past years that opened new therapeutic avenues, particularly in oncology.
引用
收藏
页码:4209 / 4222
页数:14
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