Fourth-Generation Epac-Based FRET Sensors for cAMP Feature Exceptional Brightness, Photostability and Dynamic Range: Characterization of Dedicated Sensors for FLIM, for Ratiometry and with High Affinity

被引:202
作者
Klarenbeek, Jeffrey [1 ,3 ]
Goedhart, Joachim [2 ,3 ]
van Batenburg, Aernoud [1 ,3 ]
Groenewald, Daniella [1 ,3 ]
Jalink, Kees [1 ,3 ]
机构
[1] Netherlands Canc Inst, Div Cell Biol, Amsterdam, Netherlands
[2] Univ Amsterdam, Swammerdam Inst Life Sci, Sect Mol Cytol, NL-1012 WX Amsterdam, Netherlands
[3] van Leeuwenhoek Ctr Adv Microscopy, Amsterdam, Netherlands
来源
PLOS ONE | 2015年 / 10卷 / 04期
关键词
RESONANCE ENERGY-TRANSFER; YELLOW FLUORESCENT PROTEIN; ACTIVATION; INDICATORS; GFP;
D O I
10.1371/journal.pone.0122513
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Epac-based FRET sensors have been widely used for the detection of cAMP concentrations in living cells. Originally developed by us as well as others, we have since then reported several important optimizations that make these sensors favourite among many cell biologists. We here report cloning and characterization of our fourth generation of cAMP sensors, which feature outstanding photostability, dynamic range and signal-to-noise ratio. The design is based on mTurquoise2, currently the brightest and most bleaching-resistant donor, and a new acceptor cassette that consists of a tandem of two cp(173)Venus fluorophores. We also report variants with a single point mutation, Q270E, in the Epac moiety, which decreases the dissociation constant of cAMP from 9.5 to 4 mu M, and thus increases the affinity similar to 2.5-fold. Finally, we also prepared and characterized dedicated variants with non-emitting (dark) acceptors for single-wavelength FLIM acquisition that display an exceptional near-doubling of fluorescence lifetime upon saturation of cAMP levels. We believe this generation of cAMP outperforms all other sensors and therefore recommend these sensors for all future studies.
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页数:11
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共 19 条
  • [1] Circular permutation and receptor insertion within green fluorescent proteins
    Baird, GS
    Zacharias, DA
    Tsien, RY
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (20) : 11241 - 11246
  • [2] Epac1 and cAMP-dependent protein kinase holoenzyme have similar cAMP affinity, but their cAMP domains have distinct structural features and cyclic nucleotide recognition
    Dao, Khanh Kim
    Teigen, Knut
    Kopperud, Reidun
    Hodneland, Erlend
    Schwede, Frank
    Christensen, Anne E.
    Martinez, Aurora
    Doskeland, Stein Ove
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2006, 281 (30) : 21500 - 21511
  • [3] Fluorescent indicators of cAMP and Epac activation reveal differential dynamics of cAMP signaling within discrete subcellular compartments
    DiPilato, LM
    Cheng, XD
    Zhang, J
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (47) : 16513 - 16518
  • [4] A dark yellow fluorescent protein (YFP)-based Resonance Energy-Accepting Chromoprotein (REACh) for Forster resonance energy transfer with GFP
    Ganesan, S
    Ameer-beg, SM
    Ng, TTC
    Vojnovic, B
    Wouters, FS
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (11) : 4089 - 4094
  • [5] Structure-guided evolution of cyan fluorescent proteins towards a quantum yield of 93%
    Goedhart, Joachim
    von Stetten, David
    Noirclerc-Savoye, Marjolaine
    Lelimousin, Mickael
    Joosen, Linda
    Hink, Mark A.
    van Weeren, Laura
    Gadella, Theodorus W. J., Jr.
    Royant, Antoine
    [J]. NATURE COMMUNICATIONS, 2012, 3
  • [6] Goedhart J, 2010, NAT METHODS, V7, P137, DOI [10.1038/NMETH.1415, 10.1038/nmeth.1415]
  • [7] Reducing the environmental sensitivity of yellow fluorescent protein - Mechanism and applications
    Griesbeck, O
    Baird, GS
    Campbell, RE
    Zacharias, DA
    Tsien, RY
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (31) : 29188 - 29194
  • [8] GFP-like proteins stably accumulate in lysosomes
    Katayama, Hiroyuki
    Yamamoto, Akitsugu
    Mizushima, Noboru
    Yoshimori, Tamotsu
    Miyawaki, Atsushi
    [J]. CELL STRUCTURE AND FUNCTION, 2008, 33 (01) : 1 - 12
  • [9] A mTurquoise-Based cAMP Sensor for Both FLIM and Ratiometric Read-Out Has Improved Dynamic Range
    Klarenbeek, Jeffrey B.
    Goedhart, Joachim
    Hink, Mark A.
    Gadella, Theodorus W. J.
    Jalink, Kees
    [J]. PLOS ONE, 2011, 6 (04):
  • [10] An Improved Cerulean Fluorescent Protein with Enhanced Brightness and Reduced Reversible Photoswitching
    Markwardt, Michele L.
    Kremers, Gert-Jan
    Kraft, Catherine A.
    Ray, Krishanu
    Cranfill, Paula J. C.
    Wilson, Korey A.
    Day, Richard N.
    Wachter, Rebekka M.
    Davidson, Michael W.
    Rizzo, Mark A.
    [J]. PLOS ONE, 2011, 6 (03):