Deep Neural Network-Based Respiratory Pathology Classification Using Cough Sounds

被引:12
作者
Balamurali, B. T. [1 ]
Hee, Hwan Ing [2 ,3 ]
Kapoor, Saumitra [1 ]
Teoh, Oon Hoe [4 ]
Teng, Sung Shin [5 ]
Lee, Khai Pin [5 ]
Herremans, Dorien [6 ]
Chen, Jer Ming [1 ]
机构
[1] Singapore Univ Technol & Design, Sci Math & Technol, Singapore 487372, Singapore
[2] KK Womens & Childrens Hosp, Dept Paediat Anaesthesia, Singapore 229899, Singapore
[3] Duke NUS Med Sch, Anaesthesiol & Perioperat Sci, 8 Coll Rd, Singapore 169857, Singapore
[4] KK Womens & Childrens Hosp, Dept Paediat, Resp Med Serv, Singapore 229899, Singapore
[5] KK Womens & Childrens Hosp, Dept Emergency Med, Singapore 229899, Singapore
[6] Singapore Univ Technol & Design, Informat Syst Technol & Design, Singapore 487372, Singapore
关键词
LRTI; URTI; asthma; cough classification; respiratory pathology classification; MFCCs; BiLSTM; deep neural networks;
D O I
10.3390/s21165555
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Intelligent systems are transforming the world, as well as our healthcare system. We propose a deep learning-based cough sound classification model that can distinguish between children with healthy versus pathological coughs such as asthma, upper respiratory tract infection (URTI), and lower respiratory tract infection (LRTI). To train a deep neural network model, we collected a new dataset of cough sounds, labelled with a clinician's diagnosis. The chosen model is a bidirectional long-short-term memory network (BiLSTM) based on Mel-Frequency Cepstral Coefficients (MFCCs) features. The resulting trained model when trained for classifying two classes of coughs-healthy or pathology (in general or belonging to a specific respiratory pathology)-reaches accuracy exceeding 84% when classifying the cough to the label provided by the physicians' diagnosis. To classify the subject's respiratory pathology condition, results of multiple cough epochs per subject were combined. The resulting prediction accuracy exceeds 91% for all three respiratory pathologies. However, when the model is trained to classify and discriminate among four classes of coughs, overall accuracy dropped: one class of pathological coughs is often misclassified as the other. However, if one considers the healthy cough classified as healthy and pathological cough classified to have some kind of pathology, then the overall accuracy of the four-class model is above 84%. A longitudinal study of MFCC feature space when comparing pathological and recovered coughs collected from the same subjects revealed the fact that pathological coughs, irrespective of the underlying conditions, occupy the same feature space making it harder to differentiate only using MFCC features.
引用
收藏
页数:18
相关论文
共 41 条
[11]   Receiver operating characteristics curves and related decision measures: A tutorial [J].
Brown, CD ;
Davis, HT .
CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 2006, 80 (01) :24-38
[12]   Novel Coronavirus Cough Database: NoCoCoDa [J].
Cohen-McFarlane, Madison ;
Goubran, Rafik ;
Knoefel, Frank .
IEEE ACCESS, 2020, 8 :154087-154094
[13]  
Glorot X., 2010, Proceedings of the thirteenth international conference on artificial intelligence and statistics, P249, DOI DOI 10.1109/LGRS.2016.2565705
[14]   Framewise phoneme classification with bidirectional LSTM and other neural network architectures [J].
Graves, A ;
Schmidhuber, J .
NEURAL NETWORKS, 2005, 18 (5-6) :602-610
[15]  
Graves A, 2012, STUD COMPUT INTELL, V385, P1, DOI [10.1162/neco.1997.9.1.1, 10.1007/978-3-642-24797-2]
[16]   Development of Machine Learning for Asthmatic and Healthy Voluntary Cough Sounds: A Proof of Concept Study [J].
Hee, Hwan Ing ;
Balamurali, B. T. ;
Karunakaran, Arivazhagan ;
Herremans, Dorien ;
Teoh, Onn Hoe ;
Lee, Khai Pin ;
Teng, Sung Shin ;
Lui, Simon ;
Chen, Jer Ming .
APPLIED SCIENCES-BASEL, 2019, 9 (14)
[17]  
Imran Ali, 2020, Inform Med Unlocked, V20, P100378, DOI 10.1016/j.imu.2020.100378
[18]  
Kawakami Yuta, 2014, Text, Speech and Dialogue. 17th International Conference, TSD 2014. Proceedings: LNCS 8655, P382, DOI 10.1007/978-3-319-10816-2_46
[19]   COVID-19 Artificial Intelligence Diagnosis Using Only Cough Recordings [J].
Laguarta, Jordi ;
Hueto, Ferran ;
Subirana, Brian .
IEEE OPEN JOURNAL OF ENGINEERING IN MEDICINE AND BIOLOGY, 2020, 1 (01) :275-281
[20]   Accurate and Privacy Preserving Cough Sensing using a Low-Cost Microphone [J].
Larson, Eric C. ;
Lee, TienJui ;
Liu, Sean ;
Rosenfeld, Margaret ;
Patel, Shwetak N. .
UBICOMP'11: PROCEEDINGS OF THE 2011 ACM INTERNATIONAL CONFERENCE ON UBIQUITOUS COMPUTING, 2011, :375-384