Bacillus rigui sp. nov., isolated from wetland fresh water

被引:19
作者
Baik, Keun Sik [1 ]
Lim, Chae Hong [1 ]
Park, Seong Chan [1 ]
Kim, Eun Mi [1 ,2 ]
Rhee, Moon Soo [3 ]
Seong, Chi Nam [1 ]
机构
[1] Sunchon Natl Univ, Dept Biol, Sunchon 540742, South Korea
[2] Gwangju Hlth Coll Univ, Dept Dent Hyg, Kwangju 506701, South Korea
[3] Korea Res Inst Biosci & Biotechnol, Biol Resource Ctr, Taejon 305333, South Korea
关键词
RNA GENE-SEQUENCES; COMB; NOV; EMENDED DESCRIPTION; DEOXYRIBONUCLEIC ACID; BACTERIAL SYSTEMATICS; SALT LAKE; CELL-WALL; PAENIBACILLUS; PROPOSAL; RECLASSIFICATION;
D O I
10.1099/ijs.0.018184-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two Gram-stain-positive strains, WPCB074(T) and WPCB165, were isolated from fresh water collected from the Woopo wetland (Republic of Korea). Both strains were strictly aerobic, motile, endospore-forming rods. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strains WPCB074(T) and WPCB165 belonged to the genus Bacillus and that strain WPCB074(T) was most closely related to Bacillus solisalsi YC1(T) (98.4% sequence similarity), B. barbaricus V2-BIII-A2(T) (97.7%), B. macauensis ZFHKF-1(T) (96.9%), B. arsenicus Con a/3(T) (96.4%) and B. gelatini LMG 21880(T) (95.1%). The 16S rRNA gene sequences of strains WPCB074(T) and WPCB165 differed at one position (99.9% similarity), suggesting that these two strains constitute a single species. DNA DNA relatedness between strain WPCB074(T) and the type strains of B. solisalsi, B. barbaricus, B. macauensis, B. arsenicus and B. gelatin, were 26, 17, 20, 14 and 7%, respectively. Strain WPCB074(T) was characterized by having cell-wall peptidoglycan based on meso-diaminopimelic acid, MK-7 as the predominant menaquinone and iso-C(15:0) and anteiso-C(15:0) as the major fatty acids. The DNA G+C content of strain WPCB074(T) was 41.9 mol%. On the basis of phenotypic properties, phylogeny and genomic distinctiveness, strain WPCB074(T) represents a novel species of the genus Bacillus for which the name Bacillus rigui sp. nov. is proposed. The type strain is WPCB074(T) (=KCTC 13278(T) = JCM 16348(T)).
引用
收藏
页码:2204 / 2209
页数:6
相关论文
共 51 条
  • [1] Proposal of Lysinibacillus boronitolerans gen. nov sp nov., and transfer of Bacillus fusiformis to Lysinibacillus fusiformis comb. nov and Bacillus sphaericus to Lysinibacillus sphaericus comb. nov.
    Ahmed, Iftikhar
    Yokota, Akira
    Yamazoe, Atsushi
    Fujiwara, Toru
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 1117 - 1125
  • [2] Proposal of Viridibacillus gen. nov and reclassification of Bacillus arvi, Bacillus arenosi and Bacillus neidei as Viridibacillus arvi gen. nov., comb. nov., Viridibacillus arenosi comb. nov and Viridibacillus neidei comb. nov.
    Albert, Richard A.
    Archambault, Julieta
    Lempa, Melissa
    Hurst, Beth
    Richardson, Christine
    Gruenloh, Stephanie
    Duran, Metin
    Worliczek, Hanna Lucia
    Huber, Birgit E.
    Rossello-Mora, Ramon
    Schumann, Peter
    Busse, Hans-Juergen
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 2729 - 2737
  • [3] PHYLOGENETIC HETEROGENEITY OF THE GENUS BACILLUS REVEALED BY COMPARATIVE-ANALYSIS OF SMALL-SUBUNIT-RIBOSOMAL RNA SEQUENCES
    ASH, C
    FARROW, JAE
    WALLBANKS, S
    COLLINS, MD
    [J]. LETTERS IN APPLIED MICROBIOLOGY, 1991, 13 (04) : 202 - 206
  • [4] ASH C, 1993, ANTON LEEUW INT J G, V64, P253
  • [5] Chun J., 1995, Ph.D. Thesis
  • [6] EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    Chun, Jongsik
    Lee, Jae-Hak
    Jung, Yoonyoung
    Kim, Myungjin
    Kim, Seil
    Kim, Byung Kwon
    Lim, Young-Woon
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 2259 - 2261
  • [7] A PHYLOGENETIC ANALYSIS OF THE GENUS NOCARDIA WITH 16S RIBOSOMAL-RNA GENE-SEQUENCES
    CHUN, JS
    GOODFELLOW, M
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1995, 45 (02): : 240 - 245
  • [8] CLSI, 2003, M2A8 CLSI
  • [9] Anoxybacillus contaminans sp nov and Bacillus gelatini sp nov., isolated from contaminated gelatin batches
    De Clerck, E
    Rodríguez-Díaz, M
    Vanhoutte, T
    Heyrman, J
    Logan, NA
    De Vos, P
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2004, 54 : 941 - 946
  • [10] FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x