Genome-Wide Identification and Transcript Analysis of TCP Gene Family in Banana (Musa acuminata L.)

被引：15
作者：
Wang, Jingyi [1 ]
Wang, Zhuo [1 ,2 ]
Jia, Caihong [1 ]
Miao, Hongxia [1 ,2 ]
Zhang, Jianbin [1 ]
Liu, Juhua [1 ,2 ]
Xu, Biyu [1 ]
Jin, Zhiqiang [1 ,2 ]
机构：
[1] Chinese Acad Trop Agr Sci, Inst Trop Biosci & Biotechnol, Minist Agr, Key Lab Trop Crop Biotechnol, 4 Xueyuan Rd, Haikou 571101, Hainan, Peoples R China
[2] Chinese Acad Trop Agr Sci, Hainan Acad Trop Agr Resource, Hainan Key Lab Protect & Utilizat Trop Bioresourc, 4 Xueyuan Rd, Haikou 571101, Hainan, Peoples R China
来源：
BIOCHEMICAL GENETICS | 2022年 / 60卷 / 01期
基金：
中国国家自然科学基金;
关键词：
Banana; Co-expression network; Expression characteristics; MaTCPs; Phylogenetic analysis; EXPRESSION ANALYSIS; EVOLUTION; PROTEINS; GROWTH; SOFTWARE; SEQUENCE; PATTERN;
D O I：
10.1007/s10528-021-10100-8
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
Plant-specific TEOSINTE-BRANCHED1/CYCLOIDEA/PROLIFERATING CELL FACTOR1 (TCP) gene family has versatile functions in diverse aspects of plants. However, less research on banana TCPs was done comprehensively. Accordingly, 48 banana TCP genes were characterized on aspects of gene structure, conserved motifs, phylogenetic relationship, and expression patterns. Members of the MaTCP gene family were unevenly distributed among 11 chromosomes and purification selection was the driving force of the MaTCP gene family. Gene duplication analysis indicated that segmental duplication is the major contributor to family expansion. Promoter analysis showed that MaTCPs might be involved in banana growth, development, and abiotic stress responses. Further, the expression of 12 MaTCPs was analyzed by real-time quantitative RT-PCR, and the protein interaction analysis showed that MaPCF10 and MaPCF13 may have an important function in banana fruit development and ripening. These results lay the foundation for further study of the functions of TCP genes in banana.
引用
收藏
页码：204 / 222
页数：19
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