Discrete and ultradiscrete models for biological rhythms comprising a simple negative feedback loop

被引:7
作者
Gibo, Shingo [1 ]
Ito, Hiroshi [2 ]
机构
[1] Kyushu Univ, Grad Sch Design, Minami Ku, Fukuoka 8158540, Japan
[2] Kyushu Univ, Fac Design, Minami Ku, Fukuoka 8158540, Japan
关键词
Self-sustained oscillations; Biological rhythms; Neimark-Sacker bifurcation; Boolean system; Tropical discretization; CIRCADIAN CLOCK; OSCILLATORY EXPRESSION; SEGMENTATION CLOCK; SECANT CONDITION; NETWORK MOTIFS; GENE; DYNAMICS; AUTOREGULATION; NOISE; CELLS;
D O I
10.1016/j.jtbi.2015.04.024
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Many biological rhythms are generated by negative feedback regulation. Griffith (1968) proved that a negative feedback model with two variables expressed by ordinary differential equations do not generate self-sustained oscillations. Kurosawa et al. (2002) expanded Griffith's result to the general type of negative feedback model with two variables. In this paper, we propose discrete and ultradiscrete feedback models with two variables that exhibit self-sustained oscillations. To obtain the model, we applied tropical discretization and ultradiscretization to a continuous model with two variables and then investigated its bifurcation structures and the conditions of parameters for oscillations. We found that when the degradation rate of the variables is lower than their synthesis rate, the proposed models generate oscillations by Neimark-Sacker bifurcation. We further demonstrate that the ultradiscrete model can be reduced to a Boolean system under some conditions. (C) 2015 Elsevier Ltd. All rights reserved.
引用
收藏
页码:89 / 95
页数:7
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