Evaluation of the QIAstat-Dx RP2.0 and the BioFire FilmArray RP2.1 for the Rapid Detection of Respiratory Pathogens Including SARS-CoV-2

被引:13
|
作者
Cassidy, Hayley [1 ]
van Genne, Mart [1 ]
Lizarazo-Forero, Erley [1 ]
Niesters, Hubert G. M. [1 ]
Gard, Lilli [1 ]
机构
[1] Univ Groningen, Univ Med Ctr Groningen, Dept Med Microbiol & Infect Prevent, Div Clin Virol, Groningen, Netherlands
基金
欧盟地平线“2020”;
关键词
QIAstat-Dx; BioFire FilmArray; molecular diagnostics; respiratory infections; syndromic testing; point-of-care (POC); SARS-CoV-2; INFECTION;
D O I
10.3389/fmicb.2022.854209
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Point-of-care syndromic panels allow for simultaneous and rapid detection of respiratory pathogens from nasopharyngeal swabs. The clinical performance of the QIAstat-Dx Respiratory SARS-CoV-2 panel RP2.0 (QIAstat-Dx RP2.0) and the BioFire FilmArray Respiratory panel RP2.1 (BioFire RP2.1) was evaluated for the detection of SARS-CoV-2 and other common respiratory pathogens. A total of 137 patient samples were retrospectively selected based on emergency department admission, along with 33 SARS-CoV-2 positive samples tested using a WHO laboratory developed test. The limit of detection for SARS-CoV-2 was initially evaluated for both platforms. The QIAstat-Dx RP2.0 detected SARS-CoV-2 at 500 copies/mL and had a positive percent agreement (PPA) of 85%. The BioFire RP2.1 detected SARS-CoV-2 at 50 copies/mL and had a PPA of 97%. Both platforms showed a negative percent agreement of 100% for SARS-CoV-2. Evaluation of analytical specificity from a range of common respiratory targets showed a similar performance between each platform. The QIAstat-Dx RP2.0 had an overall PPA of 82% (67-100%) in clinical samples, with differences in sensitivity depending on the respiratory target. Both platforms can be used to detect acute cases of SARS-CoV-2. While the QIAstat-Dx RP2.0 is suitable for detecting respiratory viruses within a clinical range, it has less analytical and clinical sensitivity for SARS-CoV-2 compared to the BioFire RP2.1.
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页数:9
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