Optimized protocol for gene editing in adipocytes using CRISPR-Cas9 technology

被引:3
作者
Qiu, Yan [1 ]
Ding, Qiurong [1 ,2 ]
机构
[1] Chinese Acad Sci, Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth, Shanghai Inst Biol Sci,CAS Key Lab Nutr Metab & Fo, Shanghai 200031, Peoples R China
[2] Chinese Acad Sci, Inst Stem Cell & Regenerat, Beijing 100101, Peoples R China
来源
STAR PROTOCOLS | 2021年 / 2卷 / 01期
基金
中国国家自然科学基金;
关键词
Cell culture; CRISPR; Metabolism; Molecular biology;
D O I
10.1016/j.xpro.2021.100307
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We present a detailed protocol for gene editing in adipocytes using the CRISPR-Cas technology. This protocol describes sgRNA design, preparation of lenti-CRISPR-sgRNA vectors, functional validation of sgRNAs, preparation of lentivi-ruses, and lentiviruses transduction in adipocytes. Moreover, an optimized method of gene editing using the lentiCRISPRv2 vector expressing two sgRNAs targeting two different genes has also been described.For complete details on the use and execution of this protocol, please refer to Qiu et al. (2020).
引用
收藏
页数:16
相关论文
共 9 条
  • [1] Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9
    Doench, John G.
    Fusi, Nicolo
    Sullender, Meagan
    Hegde, Mudra
    Vaimberg, Emma W.
    Donovan, Katherine F.
    Smith, Ian
    Tothova, Zuzana
    Wilen, Craig
    Orchard, Robert
    Virgin, Herbert W.
    Listgarten, Jennifer
    Root, David E.
    [J]. NATURE BIOTECHNOLOGY, 2016, 34 (02) : 184 - +
  • [2] A third-generation lentivirus vector with a conditional packaging system
    Dull, T
    Zufferey, R
    Kelly, M
    Mandel, RJ
    Nguyen, M
    Trono, D
    Naldini, L
    [J]. JOURNAL OF VIROLOGY, 1998, 72 (11) : 8463 - 8471
  • [3] Identification of a rhodanine derivative BML-260 as a potent stimulator of UCP1 expression
    Feng, Zhuanghui
    Wei, Yuda
    Zhang, Yongxian
    Qiu, Yan
    Liu, Xiaojian
    Su, Li
    Liang, Ningning
    Yin, Huiyong
    Ding, Qiurong
    [J]. THERANOSTICS, 2019, 9 (12): : 3501 - 3514
  • [4] Larcombe MR, 2019, METHODS MOL BIOL, V1940, P47, DOI 10.1007/978-1-4939-9086-3_4
  • [5] Glyburide Regulates UCP1 Expression in Adipocytes Independent of KATP Channel Blockade
    Qiu, Yan
    Yang, Yuanyuan
    Wei, Yuda
    Liu, Xiaojian
    Feng, Zhuanghui
    Zeng, Xuwen
    Chen, Yanhao
    Liu, Yan
    Zhao, Yongxu
    Chen, Lanlan
    Luo, Lijun
    Ding, Qiurong
    [J]. ISCIENCE, 2020, 23 (09)
  • [6] Screening of FDA-approved drugs identifies sutent as a modulator of UCP1 expression in brown adipose tissue
    Qiu, Yan
    Sun, Yingmin
    Xu, Danqing
    Yang, Yuanyuan
    Liu, Xiaojian
    Wei, Yuda
    Chen, Yanhao
    Feng, Zhuanghui
    Li, Shuang
    Reyad-ul Ferdous, Md
    Zhao, Yongxu
    Xu, Hongxi
    Lao, Yuanzhi
    Ding, Qiurong
    [J]. EBIOMEDICINE, 2018, 37 : 344 - 355
  • [7] Genome engineering using the CRISPR-Cas9 system
    Ran, F. Ann
    Hsu, Patrick D.
    Wright, Jason
    Agarwala, Vineeta
    Scott, David A.
    Zhang, Feng
    [J]. NATURE PROTOCOLS, 2013, 8 (11) : 2281 - 2308
  • [8] Optimized libraries for CRISPR-Cas9 genetic screens with multiple modalities
    Sanson, Kendall R.
    Hanna, Ruth E.
    Hegde, Mudra
    Donovan, Katherine F.
    Strand, Christine
    Sullender, Meagan E.
    Vaimberg, Emma W.
    Goodale, Amy
    Root, David E.
    Piccioni, Federica
    Doench, John G.
    [J]. NATURE COMMUNICATIONS, 2018, 9
  • [9] Production and purification of lentiviral vectors
    Tiscornia, Gustavo
    Singer, Oded
    Verma, Inder M.
    [J]. NATURE PROTOCOLS, 2006, 1 (01) : 241 - 245