Phylogenetic analysis of the complete mitochondrial genome of Jaydia carinatus (Kurtiformes; Apogonidae)

被引：1
作者：
Xia, Lingmin [1 ]
Zhang, Jianshe [2 ]
机构：
[1] Marine Fisheries Res Inst Zhejiang Prov, Key Lab Sustainable Utilizat Technol Res Fishery, Zhoushan, Peoples R China
[2] Zhejiang Ocean Univ, Natl Engn Lab Marine Germplasm Resources Explorat, Zhoushan, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 02期
关键词：
Jaydia carinatus; mitogenome; phylogenetic tree;
D O I：
10.1080/23802359.2020.1721360
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
The complete mitogenome of Jaydia carinatus was sequenced, that was a closed double-stranded circular molecule of 16,455 bp. We analyzed the main features of this sequence in terms of the genome organization, gene arrangement and codon usage. The overall base composition included A(27.6%), T(25.7%), C(29.6%) and G(17.1%). Moreover, the 13 protein-coding genes (PCGs) encoded 3821 amino acids in total, 12 of which used the initiation codon ATG except COI used GTG; most of them had a complete stop codon, whereas Cytb ended with the incomplete stop codon T. The phylogenetic tree was conducted to provide relationship within Kurtiformes based on the Neighbor Joining method and the NJ tree demonstrated this species had a closest relationship with Jaydia lineata, which could be a useful basis for propagation of this species.
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页码：1136 / 1137
页数：2
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