Intramolecular interactions and intramolecular hydrogen bonding in conformers of gaseous glycine

被引:49
|
作者
Pacios, LF [1 ]
Gómez, PC
机构
[1] Univ Politecn Madrid, ETS Ingn Montes, Dept Quim & Bioquim, E-28040 Madrid, Spain
[2] Univ Complutense Madrid, Fac Quim, Dept Quim Fis 1, E-28040 Madrid, Spain
关键词
glycine; conformational stability; electron density; AIM theory; intramolecular hydrogen bonding;
D O I
10.1002/jcc.1038
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Ab initio calculations at the MP2/6-311++G** level of theory led recently to the identification of 13 stable conformers of gaseous glycine with relative energies within 11 kcal/mol. The stability of every structure depends on subtle intramolecular effects arising from conformational changes. These intramolecular interactions are examined with the tools provided by the Atoms In Molecules (AIM) theory, which allows obtaining a wealth of quantum mechanics information from the molecular electron density rho (r). The analysis of the topological features of rho (r) on one side and the atomic properties integrated in the basins defined by the gradient vector field of the density on the other side makes possible to explore the different intramolecular effects in every conformer. The existence of intramolecular hydrogen bonds on some conformers is demonstrated, while the presence of other stabilizing interactions arising from favorable conformations is shown to explain the stability of other structures in the potential energy surface of glycine. (C) 2001 John Wiley & Sons, Inc.
引用
收藏
页码:702 / 716
页数:15
相关论文
共 50 条
  • [1] Intramolecular effects and relative stabilities of conformers of gaseous glycine
    Pacios, LF
    Gálvez, O
    Gómez, PC
    JOURNAL OF PHYSICAL CHEMISTRY A, 2001, 105 (21): : 5232 - 5241
  • [2] Gaseous arginine conformers and their unique intramolecular interactions
    Ling, Sanliang
    Yu, Wenbo
    Huang, Zhijian
    Lin, Zijing
    Haranczyk, Maciej
    Gutowski, Maciej
    JOURNAL OF PHYSICAL CHEMISTRY A, 2006, 110 (44): : 12282 - 12291
  • [3] Intramolecular Hydrogen Bond Energy and Cooperative Interactions in α-, β-, and γ-Cyclodextrin Conformers
    Deshmukh, Milind M.
    Bartolotti, Libero J.
    Gadre, Shridhar R.
    JOURNAL OF COMPUTATIONAL CHEMISTRY, 2011, 32 (14) : 2996 - 3004
  • [4] Conformers and intramolecular hydrogen bonding of the oxalic acid monomer and its anions
    Chen, C
    Shyu, SF
    INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, 2000, 76 (04) : 541 - 551
  • [5] The lack of intramolecular hydrogen bonding and the side chain effect in alanine conformers
    Cormanich, Rodrigo A.
    Ducati, Lucas C.
    Rittner, Roberto
    JOURNAL OF MOLECULAR STRUCTURE, 2012, 1014 : 12 - 16
  • [6] Conformers and intramolecular hydrogen bonding of the salicylic acid monomer and its anions
    Chen, C
    Shyu, SF
    JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2001, 536 (01): : 25 - 39
  • [7] Switching On/Off the Intramolecular Hydrogen Bonding of 2-Methoxyphenol Conformers: An NMR Study
    Backler, Frederick
    Wang, Feng
    AUSTRALIAN JOURNAL OF CHEMISTRY, 2020, 73 (2-3) : 222 - 229
  • [8] Hyperconjugation versus intramolecular hydrogen bond: origin of the conformational preference of gaseous glycine
    Wang, WZ
    Pu, XM
    Zheng, WX
    Wong, NB
    Tian, AM
    CHEMICAL PHYSICS LETTERS, 2003, 370 (1-2) : 147 - 153
  • [9] INTRAMOLECULAR HYDROGEN-BONDING
    DZIEMBOWSKA, T
    POLISH JOURNAL OF CHEMISTRY, 1994, 68 (08) : 1455 - 1489
  • [10] Intramolecular hydrogen bonding of nucleobases
    Crisp, GT
    Jiang, YL
    TETRAHEDRON LETTERS, 2002, 43 (17) : 3157 - 3160