Intramolecular interactions and intramolecular hydrogen bonding in conformers of gaseous glycine

被引:49
作者
Pacios, LF [1 ]
Gómez, PC
机构
[1] Univ Politecn Madrid, ETS Ingn Montes, Dept Quim & Bioquim, E-28040 Madrid, Spain
[2] Univ Complutense Madrid, Fac Quim, Dept Quim Fis 1, E-28040 Madrid, Spain
关键词
glycine; conformational stability; electron density; AIM theory; intramolecular hydrogen bonding;
D O I
10.1002/jcc.1038
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Ab initio calculations at the MP2/6-311++G** level of theory led recently to the identification of 13 stable conformers of gaseous glycine with relative energies within 11 kcal/mol. The stability of every structure depends on subtle intramolecular effects arising from conformational changes. These intramolecular interactions are examined with the tools provided by the Atoms In Molecules (AIM) theory, which allows obtaining a wealth of quantum mechanics information from the molecular electron density rho (r). The analysis of the topological features of rho (r) on one side and the atomic properties integrated in the basins defined by the gradient vector field of the density on the other side makes possible to explore the different intramolecular effects in every conformer. The existence of intramolecular hydrogen bonds on some conformers is demonstrated, while the presence of other stabilizing interactions arising from favorable conformations is shown to explain the stability of other structures in the potential energy surface of glycine. (C) 2001 John Wiley & Sons, Inc.
引用
收藏
页码:702 / 716
页数:15
相关论文
共 34 条
[1]   Ring strain and hydrogen bond acidity [J].
Alkorta, I ;
Campillo, N ;
Rozas, I ;
Elguero, J .
JOURNAL OF ORGANIC CHEMISTRY, 1998, 63 (22) :7759-7763
[2]  
Bader R. F. W., 1994, ATOMS MOL QUANTUM TH
[3]  
BADER RFW, 1992, J MOL STRUC-THEOCHEM, V87, P145
[4]  
BADER RFW, 1998, AIMPAC 95 PROGRAM PA
[5]   CONFORMATIONAL BEHAVIOR OF GASEOUS GLYCINE BY A DENSITY-FUNCTIONAL APPROACH [J].
BARONE, V ;
ADAMO, C ;
LELJ, F .
JOURNAL OF CHEMICAL PHYSICS, 1995, 102 (01) :364-370
[6]   Behavior of electron density functions in molecular interactions [J].
Bentley, J .
JOURNAL OF PHYSICAL CHEMISTRY A, 1998, 102 (29) :6043-6051
[7]   CALCULATION OF THE AVERAGE PROPERTIES OF ATOMS IN MOLECULES .2. [J].
BIEGLERKONIG, FW ;
BADER, RFW ;
TANG, TH .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1982, 3 (03) :317-328
[8]   CONFORMERS OF GASEOUS GLYCINE [J].
CSASZAR, AG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (24) :9568-9575
[9]   A topological analysis of electron density in cation-π complexes [J].
Cubero, E ;
Orozco, M ;
Luque, FJ .
JOURNAL OF PHYSICAL CHEMISTRY A, 1999, 103 (02) :315-321
[10]   Hydrogen bond versus anti-hydrogen bond: A comparative analysis based on the electron density topology [J].
Cubero, E ;
Orozco, M ;
Hobza, P ;
Luque, FJ .
JOURNAL OF PHYSICAL CHEMISTRY A, 1999, 103 (32) :6394-6401