New bioluminescence pyrophosphate assay for high-sensitivity detection of food-borne pathogens

被引:4
作者
Fei, Zhongjie [1 ]
Zhou, Dongrui [1 ]
Li, Na [1 ]
Xiao, Pengfeng [1 ]
机构
[1] Southeast Univ, Sch Biol Sci & Med Engn, Nanjing, Jiangsu, Peoples R China
基金
中国国家自然科学基金;
关键词
food application; newly bioluminescence pyrophosphate assay; pathogens; qPCR; PCR; GENES;
D O I
10.1002/bio.3734
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Traditional methods of identifying food-borne pathogens are time consuming and laborious, so innovative methods for their rapid identification must be developed. Testing for bioluminescence pyrophosphate is a convenient and fast method of detecting pathogens without complex equipment. However, the sensitivity of the method is not as high as that of other methods, and it has a very high detection limit. In this study, the method was optimized to improve its sensitivity. The shortcomings of the method were first identified and corrected using dATP alpha S instead of dATP for the polymerase chain reaction (PCR), therefore reducing the background signal. Also, when the DNA template extracted from the food-borne pathogens was purified, the new bioluminescence pyrophosphate assay had a limit of detection of <10 copy/mu l or 10 colony-forming units/ml, and its sensitivity was higher than that of fluorescent real-time quantitative PCR. Moreover, a single copy of a food-borne pathogen could be detected when a single DNA template was included in the PCR. Salmonella was detected in and isolated from 60 samples of broiler chicken, and the accuracy of the results was verified using a culture method (GB 4789.4-2010). These results showed that the new bioluminescence pyrophosphate assay has the advantages of an intuitive detection process, convenient operation, and rapid measurements. Therefore, it can be used for the rapid detection of pathogenic bacteria and probiotics in various fields.
引用
收藏
页码:355 / 364
页数:10
相关论文
共 16 条
[1]   Rapid molecular identification and differentiation of common Salmonella serovars isolated from poultry, domestic animals and foodstuff using multiplex PCR assay [J].
Alzwghaibi, A. B. ;
Yahyaraeyat, R. ;
Fasaei, B. Nayeri ;
Langeroudi, A. Ghalyanchi ;
Salehi, T. Zahraei .
ARCHIVES OF MICROBIOLOGY, 2018, 200 (07) :1009-1016
[2]   Detection of cariogenic bacteria genes by a combination of allele-specific polymerase chain reactions and a novel bioluminescent pyrophosphate assay [J].
Arakawa, H ;
Karasawa, K ;
Igarashi, T ;
Suzuki, S ;
Goto, N ;
Maeda, M .
ANALYTICAL BIOCHEMISTRY, 2004, 333 (02) :296-302
[3]   Detection of pathogens in water: from phylochips to qPCR to pyrosequencing [J].
Aw, Tiong Gim ;
Rose, Joan B. .
CURRENT OPINION IN BIOTECHNOLOGY, 2012, 23 (03) :422-430
[4]   Development and evaluation of real-time loop-mediated isothermal amplification for hepatitis B virus DNA quantification: A new tool for HBV management [J].
Cai, Ting ;
Lou, GuoQiang ;
Yang, Jin ;
Xu, Dai ;
Meng, ZhongHua .
JOURNAL OF CLINICAL VIROLOGY, 2008, 41 (04) :270-276
[5]   Simple and rapid bioluminescent detection of two verotoxin genes using allele-specific PCR of E-coli O157:H7 [J].
Imamura, O ;
Arakawa, H ;
Maeda, M .
LUMINESCENCE, 2003, 18 (02) :107-112
[6]   Optimization of pyrosequencing reads by superior successive incorporation efficiency of improved 2′-deoxyadenosine-5′-triphosphate analogs [J].
Kajiyama, Tomoharu ;
Kuwahara, Masayasu ;
Goto, Mari ;
Kambara, Hideki .
ANALYTICAL BIOCHEMISTRY, 2011, 416 (01) :8-17
[7]   Rapid and specific detection of Salmonella infections using chemically modified nucleic acid probes [J].
Machado, Isabel ;
Garrido, Victoria ;
Hernandez, Luiza, I ;
Botero, Juliana ;
Bastida, Nora ;
San-Roman, Beatriz ;
Grillo, Maria-Jesus ;
Hernandez, Frank J. .
ANALYTICA CHIMICA ACTA, 2019, 1054 :157-166
[8]   Real-time DNA sequencing using detection of pyrophosphate release [J].
Ronaghi, M ;
Karamohamed, S ;
Pettersson, B ;
Uhlen, M ;
Nyren, P .
ANALYTICAL BIOCHEMISTRY, 1996, 242 (01) :84-89
[9]   The development and impact of 454 sequencing [J].
Rothberg, Jonathan M. ;
Leamon, John H. .
NATURE BIOTECHNOLOGY, 2008, 26 (10) :1117-1124
[10]   Rapid detection of salmonellosis due to Salmonella enterica serovar Typhimurium in Peruvian commercially bred cavies, using indigenous wild bacteriophages [J].
Tamariz Ortiz, Jesus ;
Guevara Matias, Victor ;
Guerra Allison, Humberto .
GERMS, 2018, 8 (04) :178-185