GENETIC DIVERSITY OF CHINESE WILD GRAPE SPECIES BY SSR AND SRAP MARKERS

被引:23
|
作者
Liu, Chonghuai [1 ,2 ]
Fan, Xiucai [2 ]
Jiang, Jianfu [2 ]
Guo, Dalong [3 ]
Sun, Haisheng [2 ]
Zhang, Ying [2 ]
Feng, Jiancan [1 ]
机构
[1] Henan Agr Univ, Coll Hort, Zhengzhou, Henan Province, Peoples R China
[2] Chinese Acad Agr Sci, Zhengzhou Fruit Res Inst, Zhengzhou, Henan Province, Peoples R China
[3] Henan Univ Sci & Technol, Coll Forestry, Luoyang, Henan Province, Peoples R China
关键词
Chinese wild grapes; genetic diversity; SSR; SRAP; VITIS; CULTIVARS; IDENTIFICATION; LOCI; MAP;
D O I
10.5504/BBEQ.2011.0146
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Simple Sequence Repeats (SSR) and Sequence-Related Amplified Polymorphism (SRAP) were used to analyze the genetic diversity of 26 genotypes from 15 Chinese wild grape species and one interspecific hybrid of Vitis L. A total of 90 alleles were amplified by ten SSR primers, and primer heterozygosity varied from 0.653 to 0.883. Twelve out of 169 SRAP primer combinations were selected for SRAP analysis. A total of 223 bands were produced, of which 208 bands were polymorphic ones; the average percentage of polymorphic bands was 93.3%. The results of clustering analysis based on SSR markers showed that most of the wild grapes could be distinguished at genetic similarity coefficient level of 0.74, and 27 genotypes could be divided into four main clusters at 0.64. The dendrogram obtained with SRAP data was almost consistent with traditional morphological classification. At the genetic similarity coefficient of 0.84, 27 genotypes could be separated. This also confirmed that V heyneana subsp. ficifolia is a subspecies of V heyneana, and V adenoclada alone is a species.
引用
收藏
页码:2899 / 2903
页数:5
相关论文
共 50 条
  • [31] Comparison of RAMP and SSR markers for the study of wild barley genetic diversity
    Dávila, JA
    Loarce, Y
    Ramsay, L
    Waugh, R
    Ferrer, E
    HEREDITAS, 1999, 131 (01): : 5 - 13
  • [32] Assessing the genetic diversity of cultivars and wild soybeans using SSR markers
    Wang Min
    Li Run-zhi
    Yang Wan-ming
    Du Wei-jun
    AFRICAN JOURNAL OF BIOTECHNOLOGY, 2010, 9 (31): : 4857 - 4866
  • [33] Analysis of genetic diversity in Tunisian durum wheat cultivars and related wild species by SSR and AFLP markers
    Maher Medini
    Sonia Hamza
    Ahmed Rebai
    Michael Baum
    Genetic Resources and Crop Evolution, 2005, 52 : 21 - 31
  • [34] Analysis of genetic diversity in Tunisian durum wheat cultivars and related wild species by SSR and AFLP markers
    Medini, M
    Hamza, S
    Rebai, A
    Baum, M
    GENETIC RESOURCES AND CROP EVOLUTION, 2005, 52 (01) : 21 - 31
  • [35] Genetic diversity of cultivated accessions and wild species of rubber tree using EST-SSR markers
    Kuepper Cardoso Perseguini, Juliana Morini
    de Castro Romao, Lineu Roberto
    Brinez, Boris
    Scaloppi Junior, Erivaldo Jose
    Goncalves, Paulo de Souza
    Benchimol, Luciana Lasry
    PESQUISA AGROPECUARIA BRASILEIRA, 2012, 47 (08) : 1087 - 1094
  • [36] Exploitation of SSR, SRAP and CAPS-SNP markers for genetic diversity of Citrus germplasm collection
    Amar, Mohamed Hamdy
    Biswas, Manosh Kumar
    Zhang, Zongwen
    Guo, Wen-Wu
    SCIENTIA HORTICULTURAE, 2011, 128 (03) : 220 - 227
  • [37] ANALYSIS OF GENETIC DIVERSITY AMONG RAPESEED CULTIVARS AND BREEDING LINES BY SRAP AND SSR MOLECULAR MARKERS
    Channa, Siraj Ahmed
    Tian, Hongyun
    Wu, Hong Qi
    Hu, Sheng Wu
    PAKISTAN JOURNAL OF BOTANY, 2016, 48 (06) : 2409 - 2422
  • [38] Comparison of characteristics of SRAP and SSR markers in genetic diversity analysis of cultivars in Allium fistulosum L
    Li, H. -Z.
    Yin, Y. -P
    Zhnag, C. -Q
    Zhang, M.
    Li, J. -M
    SEED SCIENCE AND TECHNOLOGY, 2008, 36 (02) : 423 - 434
  • [39] COMPARATIVE ASSESSMENT OF FOUR DIFFERENT MARKERS (SSR, ISSR, SRAP AND iPBS) IN GENETIC DIVERSITY STUDIES
    Furan, Mehmet Alp
    FRESENIUS ENVIRONMENTAL BULLETIN, 2018, 27 (08): : 5462 - 5469
  • [40] Analysis of Genetic Diversity and Identification of Domestic Bred Phalaenopsis Varieties Using SRAP and SSR Markers
    Park, Pue Hee
    Park, Yong-Jin
    Kim, Mi Seon
    Lee, Young Ran
    Park, Pil Man
    Lee, Doug Soo
    Yae, Byeong Woo
    KOREAN JOURNAL OF HORTICULTURAL SCIENCE & TECHNOLOGY, 2013, 31 (03) : 337 - 343