Mining the Gastric Cancer Secretome: Identification of GRN as a Potential Diagnostic Marker for Early Gastric Cancer

被引:65
作者
Loei, Hendrick [1 ]
Tan, Hwee Tong [1 ]
Lim, Teck Kwang [2 ]
Lim, Kiat Hon [3 ]
So, Jimmy Bok-Yan [4 ]
Yeoh, Khay Guan [5 ]
Chung, Maxey C. M. [1 ,2 ]
机构
[1] Natl Univ Singapore, Yong Loo Lin Sch Med, Dept Biochem, Singapore 117597, Singapore
[2] Natl Univ Singapore, Fac Sci, Dept Biol Sci, Singapore 117543, Singapore
[3] Singapore Gen Hosp, Dept Pathol, Singapore 169608, Singapore
[4] Natl Univ Singapore, Yong Loo Lin Sch Med, Dept Surg, Singapore 119228, Singapore
[5] Natl Univ Singapore, Yong Loo Lin Sch Med, Dept Med, Singapore 119228, Singapore
基金
新加坡国家研究基金会; 英国医学研究理事会;
关键词
proteomics; gastric cancer; secretome; iTRAQ; GRN; granulin; biomarker; GRANULIN-EPITHELIN PRECURSOR; CONDITIONED MEDIA; GROWTH-FACTOR; CELL-LINES; PROGRANULIN; EXPRESSION; BIOMARKER; PROGRESSION; ACTIVATION; DISCOVERY;
D O I
10.1021/pr201014h
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Gastric cancer is the second leading cause of cancer deaths worldwide, and currently, there are no clinically relevant biomarkers for gastric cancer diagnosis or prognosis. In this study, we applied a 2D-LC-MS/MS based approach, in combination with iTRAQ labeling, to study the secretomes of the gastric cancer cell lines AGS and MKN7. By performing a comparative analysis between the conditioned media and the whole cell lysates, our workflow allowed us to differentiate the bona fide secreted proteins from the intracellular contaminants within the conditioned media. Ninety proteins were found to have higher abundance in the conditioned media as compared to the whole cell lysates of AGS and MKN7 cells. Using a signal peptide and nonclassical secretion prediction tool and an online exosome database, we demonstrated that up to 92.2% of these 90 proteins can be exported out of the cells by classical or nonclassical secretory pathways. We then performed quantitative comparisons of the secretomes between AGS and MKN7, identifying 43 differentially expressed secreted proteins. Among them, GRN was found to be frequently expressed in gastric tumor tissues, but not in normal gastric epithelia by immunohistochemistry. Sandwich ELISA assay also showed elevation of serum GRN levels in gastric cancer patients, particularly those with early gastric cancer. Receiver operating characteristic (ROC) curves analysis confirmed that serum GRN can provide diagnostic discriminations for gastric cancer patients
引用
收藏
页码:1759 / 1772
页数:14
相关论文
共 36 条
[1]  
[Anonymous], 2007, Global cancer facts and figures 2007
[2]   Feature-based prediction of non-classical and leaderless protein secretion [J].
Bendtsen, JD ;
Jensen, LJ ;
Blom, N ;
von Heijne, G ;
Brunak, S .
PROTEIN ENGINEERING DESIGN & SELECTION, 2004, 17 (04) :349-356
[3]   Software Tool for Researching Annotations of Proteins: Open-Source Protein Annotation Software with Data Visualization [J].
Bhatia, Vivek N. ;
Perlman, David H. ;
Costello, Catherine E. ;
McComb, Mark E. .
ANALYTICAL CHEMISTRY, 2009, 81 (23) :9819-9823
[4]   Elevation of serum l-lactate dehydrogenase B correlated with the clinical stage of lung cancer [J].
Chen, Yue ;
Zhang, Hao ;
Xu, Anjian ;
Li, Na ;
Liu, Jifu ;
Liu, Chuanjun ;
Lv, Dongxia ;
Wu, Shanshan ;
Huang, Lingyun ;
Yang, Shuanying ;
He, Dacheng ;
Xiao, Xueyuan .
LUNG CANCER, 2006, 54 (01) :95-102
[5]   Granulin-epithelin precursor overexpression promotes growth and invasion of hepatocellular carcinoma [J].
Cheung, ST ;
Wong, SY ;
Leung, KL ;
Chen, X ;
So, S ;
Ng, IO ;
Fan, ST .
CLINICAL CANCER RESEARCH, 2004, 10 (22) :7629-7636
[6]   Expression of Progranulin (Acrogranin/PCDGF/Granulin-Epithelin Precursor) in Benign and Malignant Ovarian Tumors and Activation of MAPK Signaling in Ovarian Cancer Cell Line [J].
Cuevas-Antonio, R. ;
Cancino, C. ;
Arechavaleta-Velasco, F. ;
Andrade, A. ;
Barron, L. ;
Estrada, I. ;
Fernandez, R. L. ;
Olguin, V. ;
Ruiz, S. ;
Imani, F. ;
Zeferino-Toquero, M. ;
Ulloa-Aguirre, A. ;
Gerton, G. L. ;
Diaz-Cueto, L. .
CANCER INVESTIGATION, 2010, 28 (05) :452-458
[7]   Granulin-epithelin precursor is a novel prognostic marker in epithelial ovarian carcinoma [J].
Davidson, B ;
Alejandro, E ;
Florenes, VA ;
Goderstad, JM ;
Risberg, B ;
Kristensen, GB ;
Trope, CG ;
Kohn, EC .
CANCER, 2004, 100 (10) :2139-2147
[8]   Modulation of mouse preimplantation embryo development by acrogranin (epithelin/granulin precursor) [J].
Díaz-Cueto, L ;
Stein, P ;
Jacobs, A ;
Schultz, RM ;
Gerton, GL .
DEVELOPMENTAL BIOLOGY, 2000, 217 (02) :406-418
[9]   Biomarker discovery from pancreatic cancer secretome using a differential proteomic approach [J].
Gronborg, M ;
Kristiansen, TZ ;
Iwahori, A ;
Chang, R ;
Reddy, R ;
Sato, N ;
Molina, H ;
Jensen, ON ;
Hruban, RH ;
Goggins, MG ;
Maitra, A ;
Pandey, A .
MOLECULAR & CELLULAR PROTEOMICS, 2006, 5 (01) :157-171
[10]   Progranulin is a potential prognostic biomarker in advanced epithelial ovarian cancers [J].
Han, Jasmine J. ;
Yu, Minshu ;
Houston, Nicole ;
Steinberg, Seth M. ;
Kohn, Elise C. .
GYNECOLOGIC ONCOLOGY, 2011, 120 (01) :5-10