Structure of the hypothetical protein TTHA1873 from Thermus thermophilus

被引:3
作者
Yuvaraj, I [1 ]
Chaudhary, Santosh Kumar [1 ]
Jeyakanthan, J. [2 ]
Sekar, K. [1 ]
机构
[1] Indian Inst Sci, Dept Computat & Data Sci, Bangalore 560012, Karnataka, India
[2] Alagappa Univ, Dept Bioinformat, Struct Biol & Bio Comp Lab, Karaikkudi 630004, Tamil Nadu, India
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2022年 / 78卷
关键词
SAD phasing; hypothetical proteins; metalloproteins; jelly-roll topology; Thermus thermophilus; TTHA1873; calcium-binding proteins; ATOM-DATABASE-SYSTEM; CRYSTAL-STRUCTURE; SEQUENCE-ANALYSIS; CRYSTALLIZATION; ANNOTATION; SEARCH; TOOL;
D O I
10.1107/S2053230X22008457
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of an uncharacterized hypothetical protein, TTHA1873 from Thermus thermophilus, has been determined by X-ray crystallography to a resolution of 1.78 angstrom using the single-wavelength anomalous dispersion method. The protein crystallized as a dimer in two space groups: P4(3)2(1)2 and P6(1)22. Structural analysis of the hypothetical protein revealed that the overall fold of TTHA1873 has a beta-sandwich jelly-roll topology with nine beta-strands. TTHA1873 is a dimeric metal-binding protein that binds to two Ca2+ ions per chain, with one on the surface and the other stabilizing the dimeric interface of the two chains. A structural homology search indicates that the protein has moderate structural similarity to one domain of cell-surface proteins or agglutinin receptor proteins. Red blood cells showed visible agglutination at high concentrations of the hypothetical protein.
引用
收藏
页码:338 / 346
页数:9
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