Stability curves of laboratory evolved thermostable mutants of a Bacillus subtilis lipase

被引:15
作者
Kamal, Md. Zahid [1 ]
Ahmad, Shoeb [1 ]
Yedavalli, Poornima [1 ]
Rao, Nalam Madhusudhana [1 ]
机构
[1] Ctr Cellular & Mol Biol, Council Sci & Ind Res, Hyderabad 500007, Andhra Pradesh, India
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS | 2010年 / 1804卷 / 09期
关键词
Lipase; Thermostability; In vitro evolution; Thermodynamics; Calorimetry; Free energy; IN-VITRO EVOLUTION; DIRECTED EVOLUTION; STRUCTURAL BASIS; CHEMICAL DENATURATION; BETA-LACTOGLOBULIN; PROTEINS; ENZYMES; THERMODYNAMICS; HEAT; NONPOLAR;
D O I
10.1016/j.bbapap.2010.06.014
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Shape of the protein stability curves changes to achieve higher melting temperature. Broadly, these changes have been classified as upward shift (increased Delta G(s)), rightward shift (increase in T(s)) and flattening of the stability curves (decrease in Delta C(p)). Comparative studies on homologous mesophilic-thermophilic protein pairs highlighted the differential contribution of these three strategies amongst proteins. But unambiguous way of identification of the strategies, which will be preferred for a protein, is still not achieved. We have performed comparative thermodynamic studies using differential scanning calorimeter (DSC) on thermostable variants of a lipase from Bacillus subtilis. These variants are products of 1, 2, 3 and 4 rounds of directed evolution and harbor mutations having definite contribution in thermostability unlike natural thermophilic proteins. We have shown that upward and rightward shift in stability curves are prime strategies in this lipase. Our results along with that from the other study on laboratory evolved xylanase A suggest that optimization of suboptimal thermodynamic parameters is having a dominant influence in selection of thermodynamic strategies for higher thermostability. (C) 2010 Elsevier B.V. All rights reserved.
引用
收藏
页码:1850 / 1856
页数:7
相关论文
共 32 条
[1]   Structural basis of selection and thermostability of laboratory evolved Bacillus subtilis lipase [J].
Acharya, P ;
Rajakumara, E ;
Sankaranarayanan, R ;
Rao, NM .
JOURNAL OF MOLECULAR BIOLOGY, 2004, 341 (05) :1271-1281
[2]   Thermostable Bacillus subtilis lipases:: In vitro evolution and structural insight [J].
Ahmad, Shoeb ;
Kamal, Md. Zahid ;
Sankaranarayanan, Rajan ;
Rao, N. Madhusudhana .
JOURNAL OF MOLECULAR BIOLOGY, 2008, 381 (02) :324-340
[3]   Thermally denatured state determines refolding in lipase: Mutational analysis [J].
Ahmad, Shoeb ;
Rao, Nalam Madhusudhana .
PROTEIN SCIENCE, 2009, 18 (06) :1183-1196
[4]  
ALEXANDER SS, 1971, BIOCHEMISTRY-US, V10, P2738, DOI 10.1021/bi00790a013
[5]   How enzymes adapt: lessons from directed evolution [J].
Arnold, FH ;
Wintrode, PL ;
Miyazaki, K ;
Gershenson, A .
TRENDS IN BIOCHEMICAL SCIENCES, 2001, 26 (02) :100-106
[6]   PROTEIN STABILITY CURVES [J].
BECKTEL, WJ ;
SCHELLMAN, JA .
BIOPOLYMERS, 1987, 26 (11) :1859-1877
[7]   THERMAL-DENATURATION OF BACTERIOPHAGE-T4 LYSOZYME AT NEUTRAL PH [J].
BECKTEL, WJ ;
BAASE, WA .
BIOPOLYMERS, 1987, 26 (05) :619-623
[8]   Advances in laboratory evolution of enzymes [J].
Bershtein, Shimon ;
Tawfik, Dan S. .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2008, 12 (02) :151-158
[9]   Activity-stability relationships in extremophilic enzymes [J].
D'Amico, S ;
Marx, JC ;
Gerday, C ;
Feller, G .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (10) :7891-7896
[10]   Temperature-dependent modulation of farnesyl diphosphate/geranylgeranyl diphosphate synthase from hyperthermophilic archaea [J].
Fujiwara, S ;
Yamanaka, A ;
Hirooka, K ;
Kobayashi, A ;
Imanaka, T ;
Fukusaki, EI .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2004, 325 (03) :1066-1074