Unambiguous Ex Situ and in Cell 2D 13C Solid-State NMR Characterization of Starch and Its Constituents

被引:28
作者
Poulhazan, Alexandre [1 ]
Arnold, Alexandre A. [1 ]
Warschawski, Dror E. [1 ,2 ,3 ]
Marcotte, Isabelle [1 ]
机构
[1] Univ Quebec Montreal, Dept Chem, Downtown Stn, POB 8888, Montreal, PQ H3C 3P8, Canada
[2] Univ Paris Diderot, CNRS, Lab Biol Physicochim Prot Membranaires, UMR 7099, 13 Rue Pierre & Marie Curie, F-75005 Paris, France
[3] IBPC, 13 Rue Pierre & Marie Curie, F-75005 Paris, France
基金
加拿大自然科学与工程研究理事会;
关键词
whole cell NMR; magic-angle spinning; 2D INADEQUATE; crystalline and amorphous starch; HELICAL MOLECULAR-STRUCTURE; LOCAL RANGE INVESTIGATIONS; CHLAMYDOMONAS-REINHARDTII; RESISTANT STARCH; AMYLOPECTIN RATIO; PACKING ANALYSIS; AMYLOSE; GRANULES; POLYSACCHARIDES; BIOSYNTHESIS;
D O I
10.3390/ijms19123817
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Starch is the most abundant energy storage molecule in plants and is an essential part of the human diet. This glucose polymer is composed of amorphous and crystalline domains in different forms (A and B types) with specific physicochemical properties that determine its bioavailability for an organism, as well as its value in the food industry. Using two-dimensional (2D) high resolution solid-state nuclear magnetic resonance (SS-NMR) on C-13-labelled starches that were obtained from Chlamydomonas reinhardtii microalgae, we established a complete and unambiguous assignment for starch and its constituents (amylopectin and amylose) in the two crystalline forms and in the amorphous state. We also assigned so far unreported non-reducing end groups and assessed starch chain length, crystallinity and amylose content. Starch was then characterized in situ, i.e., by C-13 solid-state NMR of intact microalgal cells. Our in-cell methodology also enabled the identification of the effect of nitrogen starvation on starch metabolism. This work shows how solid-state NMR can enable the identification of starch structure, chemical modifications and biosynthesis in situ in intact microorganisms, eliminating time consuming and potentially altering purification steps.
引用
收藏
页数:17
相关论文
共 63 条
[1]   Whole cell solid-state NMR study of Chlamydomonas reinhardtii microalgae [J].
Arnold, Alexandre A. ;
Bourgouin, Jean-Philippe ;
Genard, Bertrand ;
Warschawski, Dror E. ;
Tremblay, Rejean ;
Marcotte, Isabelle .
JOURNAL OF BIOMOLECULAR NMR, 2018, 70 (02) :123-131
[2]   Identification of lipid and saccharide constituents of whole microalgal cells by 13C solid-state NMR [J].
Arnold, Alexandre A. ;
Genard, Bertrand ;
Zito, Francesca ;
Tremblay, Rejean ;
Warschawski, Dror E. ;
Marcotte, Isabelle .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, 2015, 1848 (01) :369-377
[3]   PHYSIOLOGY OF STARCH STORAGE IN THE MONOCELLULAR ALGA CHLAMYDOMONAS-REINHARDTII [J].
BALL, SG ;
DIRICK, L ;
DECQ, A ;
MARTIAT, JC ;
MATAGNE, RF .
PLANT SCIENCE, 1990, 66 (01) :1-9
[4]   Understanding Starch Structure: Recent Progress [J].
Bertoft, Eric .
AGRONOMY-BASEL, 2017, 7 (03)
[5]   The Chlamydomonas genome project: a decade on [J].
Blaby, Ian K. ;
Blaby-Haas, Crysten E. ;
Tourasse, Nicolas ;
Hom, Erik F. Y. ;
Lopez, David ;
Aksoy, Munevver ;
Grossman, Arthur ;
Umen, James ;
Dutcher, Susan ;
Porter, Mary ;
King, Stephen ;
Witman, George B. ;
Stanke, Mario ;
Harris, Elizabeth H. ;
Goodstein, David ;
Grimwood, Jane ;
Schmutz, Jeremy ;
Vallon, Olivier ;
Merchant, Sabeeha S. ;
Prochnik, Simon .
TRENDS IN PLANT SCIENCE, 2014, 19 (10) :672-680
[6]  
Bogracheva TY, 2001, BIOPOLYMERS, V58, P247, DOI 10.1002/1097-0282(200103)58:3<247::AID-BIP1002>3.0.CO
[7]  
2-L
[8]   Starch granules: structure and biosynthesis [J].
Buleon, A ;
Colonna, P ;
Planchot, V ;
Ball, S .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 1998, 23 (02) :85-112
[9]   SINGLE-CRYSTALS OF AMYLOSE WITH A LOW DEGREE OF POLYMERIZATION [J].
BULEON, A ;
DUPRAT, F ;
BOOY, FP ;
CHANZY, H .
CARBOHYDRATE POLYMERS, 1984, 4 (03) :161-173
[10]   Starches from A to C - Chlamydomonas reinhardtii as a model microbial system to investigate the biosynthesis of the plant amylopectin crystal [J].
Buleon, A ;
Gallant, DJ ;
Bouchet, B ;
Mouille, C ;
DHulst, C ;
Kossmann, J ;
Ball, S .
PLANT PHYSIOLOGY, 1997, 115 (03) :949-957