The active kinome: The modern view of how active protein kinase networks fit in biological research

被引:15
作者
Alganem, Khaled [1 ]
Hamoud, Abdul-Rizaq [1 ]
Creeden, Justin F. [1 ]
Henkel, Nicholas D. [1 ]
Imami, Ali S. [1 ]
Joyce, Alex W. [1 ]
Ryan, William G., V [1 ]
Rethman, Jacob B. [1 ]
Shukla, Rammohan [1 ]
O'Donovan, Sinead M. [1 ]
Meller, Jarek [2 ,3 ,4 ,5 ,6 ]
McCullumsmith, Robert [1 ,7 ]
机构
[1] Univ Toledo, Dept Neurosci, Coll Med, Toledo, OH 43606 USA
[2] Univ Cincinnati, Dept Biomed Informat, Cincinnati, OH USA
[3] Cincinnati Childrens Hosp Med Ctr, Div Biomed Informat, Cincinnati, OH USA
[4] Univ Cincinnati, Dept Environm & Publ Hlth Sci, Div Biostat & Bioinformat, Cincinnati, OH USA
[5] Univ Cincinnati, Coll Med, Dept Pharmacol & Syst Biol, Cincinnati, OH USA
[6] Univ Cincinnati, Coll Engn & Appl Sci, Dept Elect Engn & Comp Sci, Cincinnati, OH USA
[7] ProMed, Neurosci Inst, Toledo, OH 43606 USA
关键词
Post-translational modification; Bioinformatics; PamChip; PamStation; Protein array; PHOSPHORYLATION; RESISTANCE; PATHWAYS; ACTIVATION; MECHANISMS; CONTEXT;
D O I
10.1016/j.coph.2021.11.007
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Biological regulatory networks are dynamic, intertwined, and complex systems making them challenging to study. While quantitative measurements of transcripts and proteins are key to investigate the state of a biological system, they do not inform the "active" state of regulatory networks. In consideration of that fact, "functional" proteomics assessments are needed to decipher active regulatory processes. Phosphorylation, a key posttranslation modification, is a reversible regulatory mechanism that controls the functional state of proteins. Recent advancements of high-throughput protein kinase activity profiling platforms allow for a broad assessment of protein kinase networks in complex biological systems. In conjunction with sophisticated computational modeling techniques, these profiling platforms provide datasets that inform the active state of regulatory systems in disease models and highlight potential drug targets. Taken together, system-wide profiling of protein kinase activity has become a critical component of modern molecular biology research and presents a promising avenue for drug discovery.
引用
收藏
页码:117 / 129
页数:13
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