Dissection and validation of a QTL cluster linked toRht-B1locus controlling grain weight in common wheat (Triticum aestivumL.) using near-isogenic lines

被引:36
作者
Guan, Panfeng [1 ,2 ]
Shen, Xueyi [1 ]
Mu, Qing [1 ]
Wang, Yongfa [1 ]
Wang, Xiaobo [1 ]
Chen, Yongming [1 ]
Zhao, Yue [1 ]
Chen, Xiyong [3 ]
Zhao, Aiju [3 ]
Mao, Weiwei [1 ]
Guo, Yiwen [1 ]
Xin, Mingming [1 ]
Hu, Zhaorong [1 ]
Yao, Yingyin [1 ]
Ni, Zhongfu [1 ]
Sun, Qixin [1 ]
Peng, Huiru [1 ]
机构
[1] China Agr Univ, Key Lab Crop Heterosis & Utilizat, Beijing Key Lab Crop Genet Improvement,Minist Edu, Coll Agron & Biotechnol,State Key Lab Agrobiotech, Beijing 100193, Peoples R China
[2] China Agr Univ, Coll Biol Sci, Beijing 100193, Peoples R China
[3] Hebei Acad Agr & Forestry Sci, Hebei Crop Genet Breeding Lab, Inst Cereal & Oil Crops, Shijiazhuang 050035, Hebei, Peoples R China
基金
中国博士后科学基金;
关键词
YIELD-RELATED TRAITS; GENOME-WIDE ASSOCIATION; GENETIC DISSECTION; DWARFING GENES; BREAD WHEAT; SIZE; LOCI; DOMESTICATION; ENVIRONMENTS; IMPROVEMENT;
D O I
10.1007/s00122-020-03622-z
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
Key message This study dissected and validated a QTL cluster associated with thousand grain weight on chromosome 4B using multiple near-isogenic lines in common wheat. Grain size and weight are crucial components of wheat yield. Previously, we identified a QTL cluster for thousand grain weight (TGW) on chromosome 4B using the Nongda3338 (ND3338)/Jingdong6 (JD6) doubled haploid population. Here, near-isogenic lines (NILs) in the ND3338 background were developed to dissect and validate the QTL cluster. Based on six independent BC(3)F(3:4)heterogeneous inbred families, the 4B QTL cluster was divided into two linked QTL intervals (designated 4B.1 and 4B.2 QTL). For the 4B.1 QTL, theRht-B1gene, of whichRht-B1ballele reduces plant height (PH) by 21.18-29.34 cm (34.34-53.71%), was demonstrated to be the most likely candidate gene with pleiotropic effects on grain size and TGW. For the 4B.2 QTL, the NIL(JD6)consistently showed an increase in TGW of 3.51-7.68 g (8.84-22.77%) compared with NIL(ND3338)across different field trials, along with a significant increase in PH of 2.26-6.71 cm (3.92-12.01%). Moreover, both QTL intervals had a larger effect on grain width than on grain length. Additionally, the first significant difference in 100-grain fresh weight and 100-grain dry weight between the NIL pairs of the 4B.1 QTL interval (Rht-B1) was observed at 6 days after pollination (DAP), while the differences were first visible at 30 DAP for the 4B.2 QTL interval. Collectively, our work provides a new example of QTL dissection for grain weight in wheat and lays a foundation for further map-based cloning of the major QTL that have potential applications in wheat molecular breeding for high yield.
引用
收藏
页码:2639 / 2653
页数:15
相关论文
共 71 条
[1]  
[Anonymous], 2012, METHODS MOL BIOL
[2]   Shifting the limits in wheat research and breeding using a fully annotated reference genome [J].
Appels, Rudi ;
Eversole, Kellye ;
Feuillet, Catherine ;
Keller, Beat ;
Rogers, Jane ;
Stein, Nils ;
Pozniak, Curtis J. ;
Choulet, Frederic ;
Distelfeld, Assaf ;
Poland, Jesse ;
Ronen, Gil ;
Sharpe, Andrew G. ;
Pozniak, Curtis ;
Barad, Omer ;
Baruch, Kobi ;
Keeble-Gagnere, Gabriel ;
Mascher, Martin ;
Ben-Zvi, Gil ;
Josselin, Ambre-Aurore ;
Himmelbach, Axel ;
Balfourier, Francois ;
Gutierrez-Gonzalez, Juan ;
Hayden, Matthew ;
Koh, ChuShin ;
Muehlbauer, Gary ;
Pasam, Raj K. ;
Paux, Etienne ;
Rigault, Philippe ;
Tibbits, Josquin ;
Tiwari, Vijay ;
Spannagl, Manuel ;
Lang, Daniel ;
Gundlach, Heidrun ;
Haberer, Georg ;
Mayer, Klaus F. X. ;
Ormanbekova, Danara ;
Prade, Verena ;
Simkova, Hana ;
Wicker, Thomas ;
Swarbreck, David ;
Rimbert, Helene ;
Felder, Marius ;
Guilhot, Nicolas ;
Kaithakottil, Gemy ;
Keilwagen, Jens ;
Leroy, Philippe ;
Lux, Thomas ;
Twardziok, Sven ;
Venturini, Luca ;
Juhasz, Angela .
SCIENCE, 2018, 361 (6403) :661-+
[3]   Wild emmer genome architecture and diversity elucidate wheat evolution and domestication [J].
Avni, Raz ;
Nave, Moran ;
Barad, Omer ;
Baruch, Kobi ;
Twardziok, Sven O. ;
Gundlach, Heidrun ;
Hale, Iago ;
Mascher, Martin ;
Spannagl, Manuel ;
Wiebe, Krystalee ;
Jordan, Katherine W. ;
Golan, Guy ;
Deek, Jasline ;
Ben-Zvi, Batsheva ;
Ben-Zvi, Gil ;
Himmelbach, Axel ;
MacLachlan, Ron P. ;
Sharpe, Andrew G. ;
Fritz, Allan ;
Ben-David, Roi ;
Budak, Hikmet ;
Fahima, Tzion ;
Korol, Abraham ;
Faris, Justin D. ;
Hernandez, Alvaro ;
Mikel, Mark A. ;
Levy, Avraham A. ;
Steffenson, Brian ;
Maccaferri, Marco ;
Tuberosa, Roberto ;
Cattivelli, Luigi ;
Faccioli, Primetta ;
Ceriotti, Aldo ;
Kashkush, Khalil ;
Pourkheirandish, Mohammad ;
Komatsuda, Takao ;
Eilam, Tamar ;
Sela, Hanan ;
Sharon, Amir ;
Ohad, Nir ;
Chamovitz, Daniel A. ;
Mayer, Klaus F. X. ;
Stein, Nils ;
Ronen, Gil ;
Peleg, Zvi ;
Pozniak, Curtis J. ;
Akhunov, Eduard D. ;
Distelfeld, Assaf .
SCIENCE, 2017, 357 (6346) :93-96
[4]   Worldwide phylogeography and history of wheat genetic diversity [J].
Balfourier, Francois ;
Bouchet, Sophie ;
Robert, Sandra ;
De Oliveira, Romain ;
Rimbert, Helene ;
Kitt, Jonathan ;
Choulet, Frederic ;
Appels, R. ;
Feuillet, C. ;
Keller, B. ;
Praud, S. ;
Baumann, U. ;
Budak, H. ;
Rogers, J. ;
Eversole, K. ;
Alaux, M. ;
Bejar, B. ;
Lafarge, S. ;
Lagendijk, E. ;
Derory, J. ;
Le Gouis, J. ;
Paux, Etienne .
SCIENCE ADVANCES, 2019, 5 (05)
[5]   A reductionist approach to dissecting grain weight and yield in wheat [J].
Brinton, Jemima ;
Uauy, Cristobal .
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2019, 61 (03) :337-358
[6]   Increased pericarp cell length underlies a major quantitative trait locus for grain weight in hexaploid wheat [J].
Brinton, Jemima ;
Simmonds, James ;
Minter, Francesca ;
Leverington-Waite, Michelle ;
Snape, John ;
Uauy, Cristobal .
NEW PHYTOLOGIST, 2017, 215 (03) :1026-1038
[7]   The complex origins of domesticated crops in the Fertile Crescent [J].
Brown, Terence A. ;
Jones, Martin K. ;
Powell, Wayne ;
Allaby, Robin G. .
TRENDS IN ECOLOGY & EVOLUTION, 2009, 24 (02) :103-109
[8]   Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars [J].
Cavanagh, Colin R. ;
Chao, Shiaoman ;
Wang, Shichen ;
Huang, Bevan Emma ;
Stephen, Stuart ;
Kiani, Seifollah ;
Forrest, Kerrie ;
Saintenac, Cyrille ;
Brown-Guedira, Gina L. ;
Akhunova, Alina ;
See, Deven ;
Bai, Guihua ;
Pumphrey, Michael ;
Tomar, Luxmi ;
Wong, Debbie ;
Kong, Stephan ;
Reynolds, Matthew ;
da Silva, Marta Lopez ;
Bockelman, Harold ;
Talbert, Luther ;
Anderson, James A. ;
Dreisigacker, Susanne ;
Baenziger, Stephen ;
Carter, Arron ;
Korzun, Viktor ;
Morrell, Peter Laurent ;
Dubcovsky, Jorge ;
Morell, Matthew K. ;
Sorrells, Mark E. ;
Hayden, Matthew J. ;
Akhunov, Eduard .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (20) :8057-8062
[9]   Dissection of two quantitative trait loci with pleiotropic effects on plant height and spike length linked in coupling phase on the short arm of chromosome 2D of common wheat (Triticum aestivum L.) [J].
Chai, Lingling ;
Chen, Zhaoyan ;
Bian, Ruolin ;
Zhai, Huijie ;
Cheng, Xuejiao ;
Peng, Huiru ;
Yao, Yingyin ;
Hu, Zhaorong ;
Xin, Mingming ;
Guo, Weilong ;
Sun, Qixin ;
Zhao, Aiju ;
Ni, Zhongfu .
THEORETICAL AND APPLIED GENETICS, 2018, 131 (12) :2621-2637
[10]   Frequent intra- and inter-species introgression shapes the landscape of genetic variation in bread wheat [J].
Cheng, Hong ;
Liu, Jing ;
Wen, Jia ;
Nie, Xiaojun ;
Xu, Luohao ;
Chen, Ningbo ;
Li, Zhongxing ;
Wang, Qilin ;
Zheng, Zhuqing ;
Li, Ming ;
Cui, Licao ;
Liu, Zihua ;
Bian, Jianxin ;
Wang, Zhonghua ;
Xu, Shengbao ;
Yang, Qin ;
Appels, Rudi ;
Han, Dejun ;
Song, Weining ;
Sun, Qixin ;
Jiang, Yu .
GENOME BIOLOGY, 2019, 20 (1)