Automatic lung nodule detection using a 3D deep convolutional neural network combined with a multi-scale prediction strategy in chest CTs

被引:138
作者
Gu, Yu [1 ,2 ]
Lu, Xiaoqi [1 ,2 ]
Yang, Lidong [2 ]
Zhang, Baohua [2 ]
Yu, Dahua [2 ]
Zhao, Ying [2 ]
Gao, Lixin [2 ,3 ]
Wu, Liang [2 ]
Zhou, Tao [2 ]
机构
[1] Shanghai Univ, Sch Comp Engn & Sci, Shanghai 200444, Peoples R China
[2] Inner Mongolia Univ Sci & Technol, Inner Mongolia Key Lab Pattern Recognit & Intelli, Sch Informat Engn, Baotou 014010, Peoples R China
[3] Inner Mongolia Univ Sci & Technol, Sch Foreign Languages, Baotou 014010, Peoples R China
基金
中国国家自然科学基金;
关键词
Lung nodule detection; 3D convolutional neural network; Multi-scale cube prediction; Cube clustering; Deep learning; FALSE-POSITIVE REDUCTION; LARGE-SCALE VALIDATION; PULMONARY NODULES; DETECTION SYSTEM; IMAGES; SEGMENTATION; CANCER;
D O I
10.1016/j.compbiomed.2018.10.011
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Objective: A novel computer-aided detection (CAD) scheme for lung nodule detection using a 3D deep convolutional neural network combined with a multi-scale prediction strategy is proposed to assist radiologists by providing a second opinion on accurate lung nodule detection, which is a crucial step in early diagnosis of lung cancer. Method: A 3D deep convolutional neural network (CNN) with multi-scale prediction was used to detect lung nodules after the lungs were segmented from chest CT scans, with a comprehensive method utilized. Compared with a 2D CNN, a 3D CNN can utilize richer spatial 3D contextual information and generate more discriminative features after being trained with 3D samples to fully represent lung nodules. Furthermore, a multi-scale lung nodule prediction strategy, including multi-scale cube prediction and cube clustering, is also proposed to detect extremely small nodules. Result The proposed method was evaluated on 888 thin-slice scans with 1186 nodules in the LUNA16 database. All results were obtained via 10-fold cross-validation. Three options of the proposed scheme are provided for selection according to the actual needs. The sensitivity of the proposed scheme with the primary option reached 87.94% and 92.93% at one and four false positives per scan, respectively. Meanwhile, the competition performance metric (CPM) score is very satisfying (0.7967). Conclusion: The experimental results demonstrate the outstanding detection performance of the proposed nodule detection scheme. In addition, the proposed scheme can be extended to other medical image recognition fields.
引用
收藏
页码:220 / 231
页数:12
相关论文
共 38 条
[1]   Reduced Lung-Cancer Mortality with Low-Dose Computed Tomographic Screening [J].
Aberle, Denise R. ;
Adams, Amanda M. ;
Berg, Christine D. ;
Black, William C. ;
Clapp, Jonathan D. ;
Fagerstrom, Richard M. ;
Gareen, Ilana F. ;
Gatsonis, Constantine ;
Marcus, Pamela M. ;
Sicks, JoRean D. .
NEW ENGLAND JOURNAL OF MEDICINE, 2011, 365 (05) :395-409
[2]  
Anirudh R., 2016, SPIE MED IMAGING, DOI DOI 10.1117/12.2214876P.978532
[3]  
[Anonymous], 2018, ARXIV180502279
[4]  
[Anonymous], 2017, ADV NEURAL INFORM PR
[5]   The Lung Image Database Consortium, (LIDC) and Image Database Resource Initiative (IDRI): A Completed Reference Database of Lung Nodules on CT Scans [J].
Armato, Samuel G., III ;
McLennan, Geoffrey ;
Bidaut, Luc ;
McNitt-Gray, Michael F. ;
Meyer, Charles R. ;
Reeves, Anthony P. ;
Zhao, Binsheng ;
Aberle, Denise R. ;
Henschke, Claudia I. ;
Hoffman, Eric A. ;
Kazerooni, Ella A. ;
MacMahon, Heber ;
van Beek, Edwin J. R. ;
Yankelevitz, David ;
Biancardi, Alberto M. ;
Bland, Peyton H. ;
Brown, Matthew S. ;
Engelmann, Roger M. ;
Laderach, Gary E. ;
Max, Daniel ;
Pais, Richard C. ;
Qing, David P-Y ;
Roberts, Rachael Y. ;
Smith, Amanda R. ;
Starkey, Adam ;
Batra, Poonam ;
Caligiuri, Philip ;
Farooqi, Ali ;
Gladish, Gregory W. ;
Jude, C. Matilda ;
Munden, Reginald F. ;
Petkovska, Iva ;
Quint, Leslie E. ;
Schwartz, Lawrence H. ;
Sundaram, Baskaran ;
Dodd, Lori E. ;
Fenimore, Charles ;
Gur, David ;
Petrick, Nicholas ;
Freymann, John ;
Kirby, Justin ;
Hughes, Brian ;
Casteele, Alessi Vande ;
Gupte, Sangeeta ;
Sallam, Maha ;
Heath, Michael D. ;
Kuhn, Michael H. ;
Dharaiya, Ekta ;
Burns, Richard ;
Fryd, David S. .
MEDICAL PHYSICS, 2011, 38 (02) :915-931
[6]   Automated detection of lung nodules in CT scans: Preliminary results [J].
Armato, SG ;
Giger, ML ;
MacMahon, H .
MEDICAL PHYSICS, 2001, 28 (08) :1552-1561
[7]  
Broyelle A., 2018, AUTOMATED PULMONARY
[8]   Multilevel Contextual 3-D CNNs for False Positive Reduction in Pulmonary Nodule Detection [J].
Dou, Qi ;
Chen, Hao ;
Yu, Lequan ;
Qin, Jing ;
Heng, Pheng-Ann .
IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2017, 64 (07) :1558-1567
[9]   Learning Spatiotemporal Features with 3D Convolutional Networks [J].
Du Tran ;
Bourdev, Lubomir ;
Fergus, Rob ;
Torresani, Lorenzo ;
Paluri, Manohar .
2015 IEEE INTERNATIONAL CONFERENCE ON COMPUTER VISION (ICCV), 2015, :4489-4497
[10]  
Ester M., 1996, KDD-96 Proceedings. Second International Conference on Knowledge Discovery and Data Mining, P226