Trichoderma species occurring on wood with decay symptoms in mountain forests in Central Europe: genetic and enzymatic characterization

被引:36
作者
Blaszczyk, Lidia [1 ]
Strakowska, Judyta [1 ]
Chelkowski, Jerzy [1 ]
Gabka-Buszek, Agnieszka [1 ]
Kaczmarek, Joanna [1 ]
机构
[1] Polish Acad Sci, Inst Plant Genet, Strzeszynska 34, PL-60479 Poznan, Poland
关键词
Cellulases; Molecular identification; ITS1; ITS2; rRNA; tef1; Xylanases; HARZIANUM STRAIN; RAIN-FOREST; LIFE-STYLE; SP-NOV; DIVERSITY; BIODIVERSITY; REVEALS; REESEI; SYSTEMATICS; EVOLUTION;
D O I
10.1007/s13353-015-0326-1
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The aim of this study was to explore the species diversity of Trichoderma obtained from samples of wood collected in the forests of the Gorce Mountains (location A), Karkonosze Mountains (location B) and Tatra Mountains (location C) in Central Europe and to examine the cellulolytic and xylanolytic activity of these species as an expression of their probable role in wood decay processes. The present study has led to the identification of the following species and species complex: Trichoderma atroviride P. Karst., Trichoderma citrinoviride Bissett, Trichoderma cremeum P. Chaverri & Samuels, Trichoderma gamsii Samuels & Druzhin., Trichoderma harzianum complex, Trichoderma koningii Oudem., Trichoderma koningiopsis Samuels, C. Suarez & H.C. Evans, Trichoderma longibrachiatum Rifai, Trichoderma longipile Bissett, Trichoderma sp. (Hypocrea parapilulifera B.S. Lu, Druzhin. & Samuels), Trichoderma viride Schumach. and Trichoderma viridescens complex. Among them, T. viride was observed as the most abundant species (53 % of all isolates) in all the investigated locations. The Shannon's biodiversity index (H), evenness (E), and the Simpson's biodiversity index (D) calculations for each location showed that the highest species diversity and evenness were recorded for location A-Gorce Mountains (H'aEuro parts per thousand= 1.71, E = 0.82, D = 0.79). The preliminary screening of 119 Trichoderma strains for cellulolytic and xylanolytic activity showed the real potential of all Trichoderma species originating from wood with decay symptoms to produce cellulases and xylanases-the key enzymes in plant cell wall degradation.
引用
收藏
页码:397 / 407
页数:11
相关论文
共 68 条
[1]  
[Anonymous], GORCZANSKI PARK NARO
[2]  
[Anonymous], 1998, TRICHODERMA GLIOCLAD
[3]   Transcriptional regulation of plant cell wall degradation by filamentous fungi [J].
Aro, N ;
Pakula, T ;
Penttilä, M .
FEMS MICROBIOLOGY REVIEWS, 2005, 29 (04) :719-739
[4]   Comparative transcriptomics reveals different strategies of Trichoderma mycoparasitism [J].
Atanasova, Lea ;
Le Crom, Stephane ;
Gruber, Sabine ;
Coulpier, Fanny ;
Seidl-Seiboth, Verena ;
Kubicek, Christian P. ;
Druzhinina, Irina S. .
BMC GENOMICS, 2013, 14
[5]   A novel promising Trichoderma harzianum strain for the production of a cellulolytic complex using sugarcane bagasse in natura [J].
Benoliel, Bruno ;
Goncalves Torres, Fernando Araripe ;
Pepe de Moraes, Lidia Maria .
SPRINGERPLUS, 2013, 2 :1-7
[6]   Diversity of Trichoderma spp. causing Pleurotus green mould diseases in Central Europe [J].
Blaszczyk, Lidia ;
Siwulski, Marek ;
Sobieralski, Krzysztof ;
Fruzynska-Jozwiak, Dorota .
FOLIA MICROBIOLOGICA, 2013, 58 (04) :325-333
[7]   Species diversity of Trichoderma in Poland [J].
Blaszczyk, Lidia ;
Popiel, Delfina ;
Chelkowski, Jerzy ;
Koczyk, Grzegorz ;
Samuels, Gary J. ;
Sobieralski, Krzysztof ;
Siwulski, Marek .
JOURNAL OF APPLIED GENETICS, 2011, 52 (02) :233-243
[8]   454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity [J].
Buee, M. ;
Reich, M. ;
Murat, C. ;
Morin, E. ;
Nilsson, R. H. ;
Uroz, S. ;
Martin, F. .
NEW PHYTOLOGIST, 2009, 184 (02) :449-456
[9]   A method for designing primer sets for speciation studies in filamentous ascomycetes [J].
Carbone, I ;
Kohn, LM .
MYCOLOGIA, 1999, 91 (03) :553-556
[10]   Multilocus phylogenetic structure within the Trichoderma harzianum/Hypocrea lixii complex [J].
Chaverri, P ;
Castlebury, LA ;
Samuels, GJ ;
Geiser, DM .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2003, 27 (02) :302-313