It's the Economy, Stupid: Applying (Micro)economic Principles to Microbiome Science

被引:7
作者
Kashtan, Nadav [1 ]
Bushong, Benjamin [2 ]
Leveau, Johan H. J. [3 ]
机构
[1] Hebrew Univ Jerusalem, Dept Plant Pathol & Microbiol, Inst Environm Sci, Rehovot, Israel
[2] Michigan State Univ, Dept Econ, E Lansing, MI USA
[3] Univ Calif Irvine, Dept Plant Pathol, Irvine, CA 92717 USA
关键词
agent-based modeling; economics; host-microbe interactions; individual-based modeling; microeconomics; microbiome; microbiota; phyllosphere; plant-microbe interactions;
D O I
10.1128/msystems.01033-21
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A key challenge in microbiome science is the scale mismatch problem, which arises when the scale at which microbial communities are sampled, interrogated, and averaged is different from the scale at which individual microorganisms within those communities interact with each other and with their environment. Profiling the microbial communities in a teaspoon of soil, from a scoop of fecal matter, or along a plant leaf surface represents a scale mismatch of multiple orders of magnitude, which may limit our ability to interpret or predict species interactions and community assembly within such samples. In this Perspective, we explore how economists, who are historically and topically split along the lines of micro- and macroeconomics, deal with the scale mismatch problem, and how taking clues from (micro)economists could benefit the field of microbiomics.
引用
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页数:7
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